Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CKAP2Q8WWK9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 AC009237.14-201ENST00000609975 1594 ntBASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 MIR4767-201ENST00000582827 78 ntBASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 AC007613.1-201ENST00000572811 2597 ntBASIC19.87■□□□□ 0.77
CKAP2Q8WWK9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.86■□□□□ 0.77
CKAP2Q8WWK9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 AL049812.1-201ENST00000432563 2267 ntBASIC19.85■□□□□ 0.77
CKAP2Q8WWK9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CKAP2Q8WWK9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CKAP2Q8WWK9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms