Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 KRT18P61-201ENST00000585825 1298 ntBASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SLC44A1Q8WWI5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 CYP21A1P-202ENST00000354927 1481 ntBASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SLC44A1Q8WWI5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 MYCNOS-205ENST00000641950 531 ntBASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 Z82202.1-201ENST00000623446 1880 ntBASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC44A1Q8WWI5 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC44A1Q8WWI5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 AL591742.1-201ENST00000604433 565 ntBASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC44A1Q8WWI5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms