Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 AC116050.2-201ENST00000612102 1779 ntBASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 AC079598.2-202ENST00000546624 1451 ntBASIC17.11■□□□□ 0.33
SMIM4Q8WVI0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 AC245052.3-201ENST00000450182 901 ntBASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 AL512631.2-201ENST00000604634 923 ntBASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 KRT8P36-201ENST00000489121 1440 ntBASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.1■□□□□ 0.33
SMIM4Q8WVI0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 POU5F1P4-201ENST00000413175 1085 ntBASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 AC009299.2-201ENST00000482477 511 ntBASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.09■□□□□ 0.33
SMIM4Q8WVI0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SMIM4Q8WVI0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 AC009237.14-201ENST00000609975 1594 ntBASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.08■□□□□ 0.32
SMIM4Q8WVI0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms