Protein–RNA interactions for Protein: Q8TDI7

TMC2, Transmembrane channel-like protein 2, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC2Q8TDI7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 AC060766.5-201ENST00000590539 871 ntBASIC21.66■■□□□ 1.06
TMC2Q8TDI7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.66■■□□□ 1.06
TMC2Q8TDI7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 AL691432.2-201ENST00000607222 2038 ntBASIC21.65■■□□□ 1.06
TMC2Q8TDI7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 AL390719.1-204ENST00000412397 1219 ntBASIC21.65■■□□□ 1.06
TMC2Q8TDI7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TMC2Q8TDI7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TMC2Q8TDI7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TMC2Q8TDI7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.64■■□□□ 1.06
TMC2Q8TDI7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMC2Q8TDI7 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
TMC2Q8TDI7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 AC112907.3-201ENST00000577781 2400 ntBASIC21.64■■□□□ 1.05
TMC2Q8TDI7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TMC2Q8TDI7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 AC092368.3-202ENST00000574180 1591 ntBASIC21.63■■□□□ 1.05
TMC2Q8TDI7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 PNMA6B-201ENST00000538162 1200 ntBASIC21.63■■□□□ 1.05
TMC2Q8TDI7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.63■■□□□ 1.05
TMC2Q8TDI7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TMC2Q8TDI7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
TMC2Q8TDI7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms