Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNIH3Q8TBE1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNIH3Q8TBE1 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 AC116050.2-201ENST00000612102 1779 ntBASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 AC245052.3-201ENST00000450182 901 ntBASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CNIH3Q8TBE1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 AL032819.2-201ENST00000624543 2162 ntBASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CNIH3Q8TBE1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.23■□□□□ 0.51
CNIH3Q8TBE1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms