Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 UPK3BP1-201ENST00000428678 509 ntBASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 CR392000.1-201ENST00000624770 1228 ntBASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 AC079416.2-201ENST00000625035 1193 ntBASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 AC124283.5-201ENST00000624661 1809 ntBASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SNIP1Q8TAD8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 KRT16P1-201ENST00000399124 1418 ntBASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 ATP5G1P1-201ENST00000448724 379 ntBASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNIP1Q8TAD8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 LINC01238-205ENST00000567549 1107 ntBASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
SNIP1Q8TAD8 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.89■□□□□ 0.62
SNIP1Q8TAD8 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.89■□□□□ 0.62
SNIP1Q8TAD8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SNIP1Q8TAD8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SNIP1Q8TAD8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 C2orf69P3-201ENST00000565542 1120 ntBASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNIP1Q8TAD8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 AC127496.7-201ENST00000625110 1798 ntBASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNIP1Q8TAD8 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms