Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
BEST2Q8NFU1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 C1QBPP2-201ENST00000528754 825 ntBASIC21.55■■□□□ 1.04
BEST2Q8NFU1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 MTDHP1-201ENST00000605323 784 ntBASIC21.55■■□□□ 1.04
BEST2Q8NFU1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 AC020907.5-201ENST00000624372 1936 ntBASIC21.55■■□□□ 1.04
BEST2Q8NFU1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
BEST2Q8NFU1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 AL359736.2-201ENST00000621992 437 ntBASIC21.54■■□□□ 1.04
BEST2Q8NFU1 AP006294.2-201ENST00000641667 209 ntBASIC21.54■■□□□ 1.04
BEST2Q8NFU1 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
BEST2Q8NFU1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 SMG8-203ENST00000578922 2178 ntBASIC21.53■■□□□ 1.04
BEST2Q8NFU1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 RPPH1-201ENST00000516869 333 ntBASIC21.53■■□□□ 1.04
BEST2Q8NFU1 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 KRT16P6-202ENST00000425692 1426 ntBASIC21.53■■□□□ 1.04
BEST2Q8NFU1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
BEST2Q8NFU1 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 AC124283.5-201ENST00000624661 1809 ntBASIC21.52■■□□□ 1.04
BEST2Q8NFU1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 AL121829.2-201ENST00000620908 328 ntBASIC21.52■■□□□ 1.04
BEST2Q8NFU1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
BEST2Q8NFU1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
BEST2Q8NFU1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.03
BEST2Q8NFU1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 PRKY-204ENST00000533551 1019 ntBASIC21.51■■□□□ 1.03
BEST2Q8NFU1 AL121906.2-201ENST00000621597 723 ntBASIC21.51■■□□□ 1.03
BEST2Q8NFU1 FAM197Y4-202ENST00000622692 608 ntBASIC21.51■■□□□ 1.03
BEST2Q8NFU1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
BEST2Q8NFU1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 AC073314.1-201ENST00000568729 2216 ntBASIC21.5■■□□□ 1.03
BEST2Q8NFU1 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
BEST2Q8NFU1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms