Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SIMC1Q8NDZ2 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 HLA-L-209ENST00000420110 1011 ntBASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 AL109923.1-201ENST00000618799 583 ntBASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SIMC1Q8NDZ2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 LSM12P1-201ENST00000411836 588 ntBASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 AL589743.5-201ENST00000616611 1050 ntBASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SIMC1Q8NDZ2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIMC1Q8NDZ2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
SIMC1Q8NDZ2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.83■□□□□ 0.61
SIMC1Q8NDZ2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SIMC1Q8NDZ2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SIMC1Q8NDZ2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 PTBP1P-201ENST00000554374 1601 ntBASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.82■□□□□ 0.6
SIMC1Q8NDZ2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 SLC29A4P1-201ENST00000398760 971 ntBASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SIMC1Q8NDZ2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms