Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 FSCN1P1-201ENST00000568912 1481 ntBASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCSK9Q8NBP7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCSK9Q8NBP7 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 C2orf69P3-201ENST00000565542 1120 ntBASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 AC026271.3-201ENST00000571884 352 ntBASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 KRT8P17-201ENST00000453110 1448 ntBASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 Z98882.1-201ENST00000622160 2253 ntBASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.19■■□□□ 1.14
PCSK9Q8NBP7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 AP006587.1-201ENST00000534129 1502 ntBASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 DUX4L26-201ENST00000489078 1255 ntBASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCSK9Q8NBP7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 AL049796.1-201ENST00000565336 1766 ntBASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 LIN28AP1-201ENST00000429574 405 ntBASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 C1QL1P1-201ENST00000568105 661 ntBASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 RBM42-202ENST00000586618 771 ntTSL 3 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 AL445675.2-201ENST00000620291 557 ntBASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCSK9Q8NBP7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.16■■□□□ 1.14
PCSK9Q8NBP7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.16■■□□□ 1.14
PCSK9Q8NBP7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCSK9Q8NBP7 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC22.16■■□□□ 1.14
PCSK9Q8NBP7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms