Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCDC89Q8N998 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 AC034268.1-201ENST00000441047 882 ntBASIC20.73■□□□□ 0.91
CCDC89Q8N998 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 AC010536.3-201ENST00000620306 533 ntBASIC20.73■□□□□ 0.91
CCDC89Q8N998 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCDC89Q8N998 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.73■□□□□ 0.91
CCDC89Q8N998 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 AC087633.2-202ENST00000565166 1439 ntBASIC20.72■□□□□ 0.91
CCDC89Q8N998 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 AL356652.1-201ENST00000615962 565 ntBASIC20.72■□□□□ 0.91
CCDC89Q8N998 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.72■□□□□ 0.91
CCDC89Q8N998 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCDC89Q8N998 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
CCDC89Q8N998 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCDC89Q8N998 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC89Q8N998 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.7■□□□□ 0.91
CCDC89Q8N998 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCDC89Q8N998 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.7■□□□□ 0.9
CCDC89Q8N998 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCDC89Q8N998 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCDC89Q8N998 KRT18P11-201ENST00000435214 1283 ntBASIC20.69■□□□□ 0.9
CCDC89Q8N998 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.69■□□□□ 0.9
CCDC89Q8N998 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms