Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 MIR2861-201ENST00000636310 90 ntBASIC20.54■□□□□ 0.88
PAF1Q8N7H5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.54■□□□□ 0.88
PAF1Q8N7H5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PAF1Q8N7H5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 AC091874.3-201ENST00000512672 1195 ntBASIC20.52■□□□□ 0.88
PAF1Q8N7H5 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.52■□□□□ 0.88
PAF1Q8N7H5 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PAF1Q8N7H5 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PAF1Q8N7H5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.52■□□□□ 0.87
PAF1Q8N7H5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.87
PAF1Q8N7H5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PAF1Q8N7H5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.51■□□□□ 0.87
PAF1Q8N7H5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
PAF1Q8N7H5 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms