Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 AC005521.1-201ENST00000393351 872 ntBASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TMEFF1Q8IYR6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 AL590326.2-201ENST00000625139 305 ntBASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 MIR2861-201ENST00000636310 90 ntBASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.96■□□□□ 0.79
TMEFF1Q8IYR6 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
TMEFF1Q8IYR6 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
TMEFF1Q8IYR6 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 AL031963.3-201ENST00000606441 850 ntBASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TMEFF1Q8IYR6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 LINC01568-207ENST00000641790 1380 ntBASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TMEFF1Q8IYR6 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 AL390955.1-201ENST00000428694 934 ntBASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 CR392000.1-201ENST00000624770 1228 ntBASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.93■□□□□ 0.78
TMEFF1Q8IYR6 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TMEFF1Q8IYR6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms