Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 TREX1-205ENST00000625293 1783 ntBASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRIM42Q8IWZ5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 AC093484.2-201ENST00000580996 2166 ntBASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRIM42Q8IWZ5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 IRS3P-201ENST00000223076 1006 ntBASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 AC138907.5-202ENST00000569484 235 ntBASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.9■□□□□ 0.78
TRIM42Q8IWZ5 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
TRIM42Q8IWZ5 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 AC004408.2-201ENST00000623613 2777 ntBASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRIM42Q8IWZ5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 HCG11-201ENST00000411553 5696 ntBASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 KRT87P-202ENST00000534226 1464 ntBASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TRIM42Q8IWZ5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms