Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM48Q8IWZ4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 POM121L13P-201ENST00000422362 380 ntBASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 AL158047.1-201ENST00000445918 881 ntBASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM48Q8IWZ4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 AC142381.4-202ENST00000563973 229 ntBASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM48Q8IWZ4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 AC007225.1-201ENST00000566331 1836 ntBASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM48Q8IWZ4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 AC098590.1-201ENST00000468126 897 ntBASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 AC023632.3-201ENST00000521633 145 ntBASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 AC069544.1-201ENST00000609399 999 ntBASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRIM48Q8IWZ4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
TRIM48Q8IWZ4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRIM48Q8IWZ4 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 HLA-G-202ENST00000376815 851 ntBASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 HLA-G-203ENST00000376818 1127 ntBASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.58■□□□□ 0.72
TRIM48Q8IWZ4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms