Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 POU5F1P4-201ENST00000413175 1085 ntBASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 AC079140.4-201ENST00000507448 529 ntBASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CRLF3Q8IUI8 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 RARRES2P11-201ENST00000635158 484 ntBASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CRLF3Q8IUI8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 TMEM179-206ENST00000616017 1645 ntBASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CRLF3Q8IUI8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 AC245052.3-201ENST00000450182 901 ntBASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 AC090192.1-201ENST00000517740 490 ntBASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 TNXA-203ENST00000507684 2038 ntBASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.91■□□□□ 0.78
CRLF3Q8IUI8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 AC137761.2-201ENST00000561729 223 ntBASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 AC145350.3-201ENST00000569033 163 ntBASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CRLF3Q8IUI8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms