Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RTTNQ86VV8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
RTTNQ86VV8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTTNQ86VV8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTTNQ86VV8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTTNQ86VV8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RTTNQ86VV8 AC010331.1-201ENST00000611423 582 ntBASIC17.64■□□□□ 0.41
RTTNQ86VV8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RTTNQ86VV8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.64■□□□□ 0.41
RTTNQ86VV8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 BX276092.2-201ENST00000417668 665 ntBASIC17.63■□□□□ 0.41
RTTNQ86VV8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.63■□□□□ 0.41
RTTNQ86VV8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.63■□□□□ 0.41
RTTNQ86VV8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RTTNQ86VV8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RTTNQ86VV8 GABARAPL3-202ENST00000624044 1851 ntBASIC17.62■□□□□ 0.41
RTTNQ86VV8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
RTTNQ86VV8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.61■□□□□ 0.41
RTTNQ86VV8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.61■□□□□ 0.41
RTTNQ86VV8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
RTTNQ86VV8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.61■□□□□ 0.41
RTTNQ86VV8 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
RTTNQ86VV8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.61■□□□□ 0.41
RTTNQ86VV8 AC099778.1-201ENST00000568593 1911 ntBASIC17.61■□□□□ 0.41
RTTNQ86VV8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RTTNQ86VV8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.6■□□□□ 0.41
RTTNQ86VV8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.6■□□□□ 0.41
RTTNQ86VV8 AC008550.1-201ENST00000511500 884 ntBASIC17.6■□□□□ 0.41
RTTNQ86VV8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.6■□□□□ 0.41
RTTNQ86VV8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.6■□□□□ 0.41
RTTNQ86VV8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.6■□□□□ 0.41
RTTNQ86VV8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
RTTNQ86VV8 AC093787.1-201ENST00000450396 207 ntBASIC17.6■□□□□ 0.41
RTTNQ86VV8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 MYC-209ENST00000641252 345 ntBASIC17.6■□□□□ 0.41
RTTNQ86VV8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTTNQ86VV8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms