Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AL109923.1-201ENST00000618799 583 ntBASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COLCA1Q6ZS62 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
COLCA1Q6ZS62 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
COLCA1Q6ZS62 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COLCA1Q6ZS62 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COLCA1Q6ZS62 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 TMEM179-206ENST00000616017 1645 ntBASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 AC104771.1-201ENST00000603335 964 ntBASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
COLCA1Q6ZS62 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COLCA1Q6ZS62 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 AC097658.1-201ENST00000475555 843 ntBASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 AL138781.1-201ENST00000566567 1274 ntBASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COLCA1Q6ZS62 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COLCA1Q6ZS62 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms