Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 AC011767.1-201ENST00000617410 1153 ntBASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF111Q6ZNA4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 AC245052.3-201ENST00000450182 901 ntBASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 MFSD11-216ENST00000590393 1141 ntBASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RNF111Q6ZNA4 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF111Q6ZNA4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 AC093503.3-201ENST00000624917 2352 ntBASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 AC010536.3-201ENST00000620306 533 ntBASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF111Q6ZNA4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF111Q6ZNA4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF111Q6ZNA4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF111Q6ZNA4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF111Q6ZNA4 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF111Q6ZNA4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms