Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CD109Q6YHK3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC30.72■■■□□ 2.51
CD109Q6YHK3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CD109Q6YHK3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
CD109Q6YHK3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC30.71■■■□□ 2.51
CD109Q6YHK3 CD70-202ENST00000423145 881 ntTSL 2 BASIC30.71■■■□□ 2.51
CD109Q6YHK3 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.71■■■□□ 2.51
CD109Q6YHK3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC30.71■■■□□ 2.51
CD109Q6YHK3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC30.71■■■□□ 2.51
CD109Q6YHK3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CD109Q6YHK3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CD109Q6YHK3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC30.7■■■□□ 2.51
CD109Q6YHK3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC30.7■■■□□ 2.51
CD109Q6YHK3 AC011484.1-201ENST00000377652 1995 ntBASIC30.7■■■□□ 2.51
CD109Q6YHK3 HIST1H2APS4-201ENST00000362070 348 ntBASIC30.7■■■□□ 2.5
CD109Q6YHK3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC30.7■■■□□ 2.5
CD109Q6YHK3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CD109Q6YHK3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC30.7■■■□□ 2.5
CD109Q6YHK3 MIR2861-201ENST00000636310 90 ntBASIC30.7■■■□□ 2.5
CD109Q6YHK3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CD109Q6YHK3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CD109Q6YHK3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC30.69■■■□□ 2.5
CD109Q6YHK3 AC116407.4-201ENST00000623319 1061 ntBASIC30.69■■■□□ 2.5
CD109Q6YHK3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC30.69■■■□□ 2.5
CD109Q6YHK3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
CD109Q6YHK3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC30.68■■■□□ 2.5
CD109Q6YHK3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC30.68■■■□□ 2.5
CD109Q6YHK3 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC30.68■■■□□ 2.5
CD109Q6YHK3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC30.68■■■□□ 2.5
CD109Q6YHK3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC30.68■■■□□ 2.5
CD109Q6YHK3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CD109Q6YHK3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CD109Q6YHK3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CD109Q6YHK3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CD109Q6YHK3 AC005332.1-201ENST00000577698 1310 ntBASIC30.67■■■□□ 2.5
CD109Q6YHK3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CD109Q6YHK3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC30.67■■■□□ 2.5
CD109Q6YHK3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
CD109Q6YHK3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
CD109Q6YHK3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 AP000692.2-201ENST00000608391 879 ntBASIC30.66■■■□□ 2.5
CD109Q6YHK3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CD109Q6YHK3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CD109Q6YHK3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
CD109Q6YHK3 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CD109Q6YHK3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC30.65■■■□□ 2.5
CD109Q6YHK3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CD109Q6YHK3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC30.65■■■□□ 2.5
CD109Q6YHK3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC30.65■■■□□ 2.5
CD109Q6YHK3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CD109Q6YHK3 AC011558.1-201ENST00000623459 338 ntBASIC30.65■■■□□ 2.5
CD109Q6YHK3 AC116562.4-202ENST00000641738 218 ntBASIC30.65■■■□□ 2.5
CD109Q6YHK3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CD109Q6YHK3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
CD109Q6YHK3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CD109Q6YHK3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CD109Q6YHK3 HLA-G-202ENST00000376815 851 ntBASIC30.64■■■□□ 2.5
CD109Q6YHK3 HLA-G-203ENST00000376818 1127 ntBASIC30.64■■■□□ 2.5
CD109Q6YHK3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC30.64■■■□□ 2.5
CD109Q6YHK3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.64■■■□□ 2.5
CD109Q6YHK3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
CD109Q6YHK3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CD109Q6YHK3 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CD109Q6YHK3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CD109Q6YHK3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.64■■■□□ 2.5
CD109Q6YHK3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC30.64■■■□□ 2.49
CD109Q6YHK3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CD109Q6YHK3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC30.64■■■□□ 2.49
CD109Q6YHK3 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
CD109Q6YHK3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
CD109Q6YHK3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
CD109Q6YHK3 AC141257.4-201ENST00000634557 245 ntBASIC30.64■■■□□ 2.49
CD109Q6YHK3 AC136944.6-201ENST00000634818 245 ntBASIC30.64■■■□□ 2.49
CD109Q6YHK3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
CD109Q6YHK3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC30.63■■■□□ 2.49
CD109Q6YHK3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CD109Q6YHK3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms