Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 C1QL1P1-201ENST00000568105 661 ntBASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 AC026271.3-201ENST00000571884 352 ntBASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNKSR3Q6P9H4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 AC010203.1-204ENST00000548782 407 ntBASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 C2orf69P3-201ENST00000565542 1120 ntBASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNKSR3Q6P9H4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.64■■□□□ 1.06
CNKSR3Q6P9H4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 MESTP1-201ENST00000404287 994 ntBASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 LIN28AP1-201ENST00000429574 405 ntBASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 AL445675.2-201ENST00000620291 557 ntBASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNKSR3Q6P9H4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 KRT8P17-201ENST00000453110 1448 ntBASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 AC087388.1-201ENST00000571370 1112 ntBASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 AP005242.2-201ENST00000580065 1175 ntBASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 DGCR10-201ENST00000609839 495 ntBASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
CNKSR3Q6P9H4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 Z98882.1-201ENST00000622160 2253 ntBASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 AP006587.1-201ENST00000534129 1502 ntBASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 ATP5G1P1-201ENST00000448724 379 ntBASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNKSR3Q6P9H4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CNKSR3Q6P9H4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms