Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CASC4Q6P4E1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.39■□□□□ 0.85
CASC4Q6P4E1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CASC4Q6P4E1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 CYP21A1P-202ENST00000354927 1481 ntBASIC20.38■□□□□ 0.85
CASC4Q6P4E1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 KRT18P5-201ENST00000436075 1291 ntBASIC20.38■□□□□ 0.85
CASC4Q6P4E1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 AC016405.3-201ENST00000607710 860 ntBASIC20.38■□□□□ 0.85
CASC4Q6P4E1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CASC4Q6P4E1 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.38■□□□□ 0.85
CASC4Q6P4E1 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
CASC4Q6P4E1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 MFSD11-216ENST00000590393 1141 ntBASIC20.36■□□□□ 0.85
CASC4Q6P4E1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
CASC4Q6P4E1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.35■□□□□ 0.85
CASC4Q6P4E1 AC007322.4-201ENST00000509611 723 ntBASIC20.35■□□□□ 0.85
CASC4Q6P4E1 AL162412.1-201ENST00000567129 965 ntBASIC20.35■□□□□ 0.85
CASC4Q6P4E1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms