Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
TMEM53Q6P2H8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 AC245052.3-201ENST00000450182 901 ntBASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TMEM53Q6P2H8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 SLC7A5P1-201ENST00000568957 537 ntBASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 UBE2DNL-204ENST00000602536 740 ntBASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TMEM53Q6P2H8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 MYCNOS-205ENST00000641950 531 ntBASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TMEM53Q6P2H8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
TMEM53Q6P2H8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TMEM53Q6P2H8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TMEM53Q6P2H8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms