Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 SLC25A1P4-201ENST00000567977 778 ntBASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 C1QL1P1-201ENST00000568105 661 ntBASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PTCRAQ6ISU1 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 AC116562.4-202ENST00000641738 218 ntBASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PTCRAQ6ISU1 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PTCRAQ6ISU1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 HLA-G-202ENST00000376815 851 ntBASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 HLA-G-203ENST00000376818 1127 ntBASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 AC011558.1-201ENST00000623459 338 ntBASIC20.73■□□□□ 0.91
PTCRAQ6ISU1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
PTCRAQ6ISU1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 CCR12P-201ENST00000446203 998 ntBASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PTCRAQ6ISU1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms