Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 KRT8P17-201ENST00000453110 1448 ntBASIC20.61■□□□□ 0.89
ALFQ53S48 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.61■□□□□ 0.89
ALFQ53S48 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.61■□□□□ 0.89
ALFQ53S48 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
ALFQ53S48 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
ALFQ53S48 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.61■□□□□ 0.89
ALFQ53S48 AL031963.3-201ENST00000606441 850 ntBASIC20.61■□□□□ 0.89
ALFQ53S48 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.61■□□□□ 0.89
ALFQ53S48 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
ALFQ53S48 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 KRT8P20-201ENST00000423953 1409 ntBASIC20.61■□□□□ 0.89
ALFQ53S48 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ALFQ53S48 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.61■□□□□ 0.89
ALFQ53S48 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
ALFQ53S48 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALFQ53S48 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.6■□□□□ 0.89
ALFQ53S48 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.6■□□□□ 0.89
ALFQ53S48 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALFQ53S48 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.6■□□□□ 0.89
ALFQ53S48 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALFQ53S48 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.6■□□□□ 0.89
ALFQ53S48 FAM201B-201ENST00000458407 597 ntBASIC20.6■□□□□ 0.89
ALFQ53S48 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.6■□□□□ 0.89
ALFQ53S48 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.6■□□□□ 0.89
ALFQ53S48 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.6■□□□□ 0.89
ALFQ53S48 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.6■□□□□ 0.89
ALFQ53S48 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ALFQ53S48 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ALFQ53S48 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ALFQ53S48 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ALFQ53S48 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.59■□□□□ 0.89
ALFQ53S48 AL162377.1-201ENST00000618844 1793 ntBASIC20.59■□□□□ 0.89
ALFQ53S48 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ALFQ53S48 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ALFQ53S48 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.59■□□□□ 0.89
ALFQ53S48 AC008687.6-201ENST00000596318 630 ntBASIC20.59■□□□□ 0.89
ALFQ53S48 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ALFQ53S48 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.59■□□□□ 0.89
ALFQ53S48 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.59■□□□□ 0.89
ALFQ53S48 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ALFQ53S48 AL391422.3-201ENST00000603791 2761 ntBASIC20.58■□□□□ 0.89
ALFQ53S48 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
ALFQ53S48 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
ALFQ53S48 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.58■□□□□ 0.89
ALFQ53S48 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ALFQ53S48 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.58■□□□□ 0.89
ALFQ53S48 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.58■□□□□ 0.89
ALFQ53S48 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.58■□□□□ 0.89
ALFQ53S48 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.58■□□□□ 0.89
ALFQ53S48 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.57■□□□□ 0.88
ALFQ53S48 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.57■□□□□ 0.88
ALFQ53S48 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ALFQ53S48 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 HLA-G-202ENST00000376815 851 ntBASIC20.57■□□□□ 0.88
ALFQ53S48 HLA-G-203ENST00000376818 1127 ntBASIC20.57■□□□□ 0.88
ALFQ53S48 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.57■□□□□ 0.88
ALFQ53S48 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.57■□□□□ 0.88
ALFQ53S48 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.57■□□□□ 0.88
ALFQ53S48 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.57■□□□□ 0.88
ALFQ53S48 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.57■□□□□ 0.88
ALFQ53S48 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 AC006058.3-201ENST00000606217 1069 ntBASIC20.57■□□□□ 0.88
ALFQ53S48 AC120498.8-201ENST00000614275 531 ntBASIC20.57■□□□□ 0.88
ALFQ53S48 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.57■□□□□ 0.88
ALFQ53S48 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
ALFQ53S48 AC124283.5-201ENST00000624661 1809 ntBASIC20.57■□□□□ 0.88
ALFQ53S48 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ALFQ53S48 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.57■□□□□ 0.88
ALFQ53S48 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.56■□□□□ 0.88
ALFQ53S48 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
ALFQ53S48 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
ALFQ53S48 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ALFQ53S48 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms