Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DCAF4L1Q3SXM0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 AL137060.1-201ENST00000618151 2648 ntBASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 KRASP1-201ENST00000407852 552 ntBASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 KRT16P6-202ENST00000425692 1426 ntBASIC21.72■■□□□ 1.07
DCAF4L1Q3SXM0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 AC110285.5-201ENST00000611501 352 ntBASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DCAF4L1Q3SXM0 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
DCAF4L1Q3SXM0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
DCAF4L1Q3SXM0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DCAF4L1Q3SXM0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 AC008550.1-201ENST00000511500 884 ntBASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DCAF4L1Q3SXM0 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.68■■□□□ 1.06
DCAF4L1Q3SXM0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCAF4L1Q3SXM0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
DCAF4L1Q3SXM0 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.68■■□□□ 1.06
DCAF4L1Q3SXM0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.68■■□□□ 1.06
DCAF4L1Q3SXM0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DCAF4L1Q3SXM0 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms