Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PDS5AQ29RF7 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 AC113410.3-201ENST00000623366 203 ntBASIC24.12■■□□□ 1.45
PDS5AQ29RF7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PDS5AQ29RF7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 AL353807.1-201ENST00000427475 662 ntBASIC24.11■■□□□ 1.45
PDS5AQ29RF7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PDS5AQ29RF7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 AC116351.2-201ENST00000606540 1585 ntBASIC24.1■■□□□ 1.45
PDS5AQ29RF7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 KRT16P6-202ENST00000425692 1426 ntBASIC24.1■■□□□ 1.45
PDS5AQ29RF7 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 AL353708.3-201ENST00000610272 989 ntBASIC24.1■■□□□ 1.45
PDS5AQ29RF7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC24.1■■□□□ 1.45
PDS5AQ29RF7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 AF186192.3-201ENST00000583427 947 ntBASIC24.09■■□□□ 1.45
PDS5AQ29RF7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.09■■□□□ 1.45
PDS5AQ29RF7 AC004264.1-201ENST00000608354 794 ntBASIC24.09■■□□□ 1.45
PDS5AQ29RF7 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PDS5AQ29RF7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDS5AQ29RF7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PDS5AQ29RF7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PDS5AQ29RF7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PDS5AQ29RF7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
PDS5AQ29RF7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PDS5AQ29RF7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PDS5AQ29RF7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PDS5AQ29RF7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
PDS5AQ29RF7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC24.07■■□□□ 1.44
PDS5AQ29RF7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms