Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 Z98882.1-201ENST00000622160 2253 ntBASIC19.6■□□□□ 0.73
CACNA1EQ15878 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
CACNA1EQ15878 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CACNA1EQ15878 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.59■□□□□ 0.73
CACNA1EQ15878 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1EQ15878 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1EQ15878 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.58■□□□□ 0.73
CACNA1EQ15878 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.58■□□□□ 0.73
CACNA1EQ15878 C1QL1P1-201ENST00000568105 661 ntBASIC19.58■□□□□ 0.73
CACNA1EQ15878 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CACNA1EQ15878 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.58■□□□□ 0.73
CACNA1EQ15878 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CACNA1EQ15878 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1EQ15878 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1EQ15878 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1EQ15878 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CACNA1EQ15878 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.58■□□□□ 0.72
CACNA1EQ15878 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 AL024507.2-201ENST00000606070 2574 ntBASIC19.57■□□□□ 0.72
CACNA1EQ15878 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1EQ15878 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.57■□□□□ 0.72
CACNA1EQ15878 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1EQ15878 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1EQ15878 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.57■□□□□ 0.72
CACNA1EQ15878 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.57■□□□□ 0.72
CACNA1EQ15878 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CACNA1EQ15878 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 AC244015.2-201ENST00000616358 1861 ntBASIC19.56■□□□□ 0.72
CACNA1EQ15878 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CACNA1EQ15878 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.56■□□□□ 0.72
CACNA1EQ15878 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CACNA1EQ15878 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.55■□□□□ 0.72
CACNA1EQ15878 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CACNA1EQ15878 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms