Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC116407.4-201ENST00000623319 1061 ntBASIC35.57■■■■□ 3.29
HMGXB3Q12766 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
HMGXB3Q12766 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC35.57■■■■□ 3.28
HMGXB3Q12766 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
HMGXB3Q12766 YBX1P10-201ENST00000444752 975 ntBASIC35.57■■■■□ 3.28
HMGXB3Q12766 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
HMGXB3Q12766 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
HMGXB3Q12766 GOLGA2P6-201ENST00000340929 2049 ntBASIC35.56■■■■□ 3.28
HMGXB3Q12766 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
HMGXB3Q12766 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
HMGXB3Q12766 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
HMGXB3Q12766 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC35.56■■■■□ 3.28
HMGXB3Q12766 IPPK-202ENST00000375522 882 ntTSL 3 BASIC35.56■■■■□ 3.28
HMGXB3Q12766 AC026396.1-201ENST00000419388 421 ntBASIC35.56■■■■□ 3.28
HMGXB3Q12766 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC35.56■■■■□ 3.28
HMGXB3Q12766 CD320-202ENST00000537716 1119 ntTSL 2 BASIC35.56■■■■□ 3.28
HMGXB3Q12766 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC35.56■■■■□ 3.28
HMGXB3Q12766 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC35.56■■■■□ 3.28
HMGXB3Q12766 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
HMGXB3Q12766 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
HMGXB3Q12766 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC35.55■■■■□ 3.28
HMGXB3Q12766 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC35.55■■■■□ 3.28
HMGXB3Q12766 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC35.55■■■■□ 3.28
HMGXB3Q12766 IER3-202ENST00000376377 1350 ntBASIC35.55■■■■□ 3.28
HMGXB3Q12766 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC35.54■■■■□ 3.28
HMGXB3Q12766 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC35.54■■■■□ 3.28
HMGXB3Q12766 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
HMGXB3Q12766 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC35.54■■■■□ 3.28
HMGXB3Q12766 AC008622.2-201ENST00000617006 1229 ntBASIC35.54■■■■□ 3.28
HMGXB3Q12766 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
HMGXB3Q12766 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
HMGXB3Q12766 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
HMGXB3Q12766 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC35.53■■■■□ 3.28
HMGXB3Q12766 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
HMGXB3Q12766 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC35.53■■■■□ 3.28
HMGXB3Q12766 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
HMGXB3Q12766 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC35.53■■■■□ 3.28
HMGXB3Q12766 RCC2P6-201ENST00000526625 1557 ntBASIC35.53■■■■□ 3.28
HMGXB3Q12766 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC35.53■■■■□ 3.28
HMGXB3Q12766 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC35.53■■■■□ 3.28
HMGXB3Q12766 ANKRD20A18P-201ENST00000359341 492 ntBASIC35.52■■■■□ 3.28
HMGXB3Q12766 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC35.52■■■■□ 3.28
HMGXB3Q12766 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 HCG4P8-203ENST00000443049 980 ntBASIC35.52■■■■□ 3.28
HMGXB3Q12766 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC35.52■■■■□ 3.28
HMGXB3Q12766 AC010653.2-201ENST00000623505 997 ntBASIC35.52■■■■□ 3.28
HMGXB3Q12766 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC35.52■■■■□ 3.28
HMGXB3Q12766 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC35.52■■■■□ 3.28
HMGXB3Q12766 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC35.52■■■■□ 3.28
HMGXB3Q12766 TSPY5P-201ENST00000426936 936 ntBASIC35.52■■■■□ 3.28
HMGXB3Q12766 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC35.52■■■■□ 3.28
HMGXB3Q12766 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
HMGXB3Q12766 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC35.51■■■■□ 3.28
HMGXB3Q12766 AC005332.1-201ENST00000577698 1310 ntBASIC35.51■■■■□ 3.28
HMGXB3Q12766 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC35.51■■■■□ 3.28
HMGXB3Q12766 HIST1H2APS4-201ENST00000362070 348 ntBASIC35.51■■■■□ 3.27
HMGXB3Q12766 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.27
HMGXB3Q12766 CLEC4GP1-201ENST00000596555 870 ntBASIC35.51■■■■□ 3.27
HMGXB3Q12766 AP000692.2-201ENST00000608391 879 ntBASIC35.51■■■■□ 3.27
HMGXB3Q12766 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC35.51■■■■□ 3.27
HMGXB3Q12766 STAC-204ENST00000457375 1366 ntTSL 2 BASIC35.51■■■■□ 3.27
HMGXB3Q12766 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC35.5■■■■□ 3.27
HMGXB3Q12766 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
HMGXB3Q12766 HLA-G-202ENST00000376815 851 ntBASIC35.5■■■■□ 3.27
HMGXB3Q12766 HLA-G-203ENST00000376818 1127 ntBASIC35.5■■■■□ 3.27
HMGXB3Q12766 COX11P1-201ENST00000489116 835 ntBASIC35.5■■■■□ 3.27
HMGXB3Q12766 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
HMGXB3Q12766 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 GPX4-207ENST00000589115 812 ntTSL 2 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
HMGXB3Q12766 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
HMGXB3Q12766 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC35.5■■■■□ 3.27
HMGXB3Q12766 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC35.49■■■■□ 3.27
HMGXB3Q12766 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC35.49■■■■□ 3.27
HMGXB3Q12766 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC35.49■■■■□ 3.27
HMGXB3Q12766 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC35.49■■■■□ 3.27
HMGXB3Q12766 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC35.49■■■■□ 3.27
HMGXB3Q12766 AC092647.4-201ENST00000457211 535 ntBASIC35.49■■■■□ 3.27
HMGXB3Q12766 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC35.49■■■■□ 3.27
HMGXB3Q12766 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC35.49■■■■□ 3.27
HMGXB3Q12766 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms