Protein–RNA interactions for Protein: Q01476

UBP2, Ubiquitin carboxyl-terminal hydrolase 2, yeastyeast

Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP2Q01476 YOL019W-AYOL019W-A 153 nt2.5□□□□□ -2.01
UBP2Q01476 HSL1YKL101W 4557 nt2.5□□□□□ -2.01
UBP2Q01476 TOR1YJR066W 7413 nt2.49□□□□□ -2.01
UBP2Q01476 SMC6YLR383W 3345 nt2.49□□□□□ -2.01
UBP2Q01476 CSF1YLR087C 8877 nt2.49□□□□□ -2.01
UBP2Q01476 ADR1YDR216W 3972 nt2.48□□□□□ -2.01
UBP2Q01476 YBR196C-AYBR196C-A 150 nt2.48□□□□□ -2.01
UBP2Q01476 tC(GCA)BtC(GCA)B 72 nt2.47□□□□□ -2.01
UBP2Q01476 tC(GCA)GtC(GCA)G 72 nt2.47□□□□□ -2.01
UBP2Q01476 tC(GCA)P1tC(GCA)P1 72 nt2.47□□□□□ -2.01
UBP2Q01476 tC(GCA)P2tC(GCA)P2 72 nt2.47□□□□□ -2.01
UBP2Q01476 YML002WYML002W 2214 nt2.47□□□□□ -2.01
UBP2Q01476 NOP9YJL010C 2001 nt2.47□□□□□ -2.01
UBP2Q01476 AGC1YPR021C 2709 nt2.47□□□□□ -2.01
UBP2Q01476 MET18YIL128W 3099 nt2.45□□□□□ -2.02
UBP2Q01476 BUD2YKL092C 3315 nt2.45□□□□□ -2.02
UBP2Q01476 PDR3YBL005W 2931 nt2.45□□□□□ -2.02
UBP2Q01476 IRA2YOL081W 9240 nt2.45□□□□□ -2.02
UBP2Q01476 AMS1YGL156W 3252 nt2.44□□□□□ -2.02
UBP2Q01476 VPS13YLL040C 9435 nt2.44□□□□□ -2.02
UBP2Q01476 FRK1YPL141C 2598 nt2.44□□□□□ -2.02
UBP2Q01476 YER172C-AYER172C-A 381 nt2.44□□□□□ -2.02
UBP2Q01476 RSM22YKL155C 1887 nt2.43□□□□□ -2.02
UBP2Q01476 YLR041WYLR041W 321 nt2.42□□□□□ -2.02
UBP2Q01476 COA6YMR244C-A 315 nt2.42□□□□□ -2.02
UBP2Q01476 YOR343W-BYOR343W-B 5313 nt2.42□□□□□ -2.02
UBP2Q01476 TRL1YJL087C 2484 nt2.41□□□□□ -2.02
UBP2Q01476 TIM9YEL020W-A 264 nt2.41□□□□□ -2.02
UBP2Q01476 SEY1YOR165W 2331 nt2.41□□□□□ -2.02
UBP2Q01476 UBR1YGR184C 5853 nt2.41□□□□□ -2.02
UBP2Q01476 SEC21YNL287W 2808 nt2.41□□□□□ -2.02
UBP2Q01476 NUP100YKL068W 2880 nt2.4□□□□□ -2.02
UBP2Q01476 snR75snR75 89 nt2.4□□□□□ -2.03
UBP2Q01476 TOF1YNL273W 3717 nt2.4□□□□□ -2.03
UBP2Q01476 YKL096C-BYKL096C-B 150 nt2.39□□□□□ -2.03
UBP2Q01476 SGS1YMR190C 4344 nt2.39□□□□□ -2.03
UBP2Q01476 DNF1YER166W 4716 nt2.39□□□□□ -2.03
UBP2Q01476 CHC1YGL206C 4962 nt2.38□□□□□ -2.03
UBP2Q01476 YHR180W-AYHR180W-A 183 nt2.38□□□□□ -2.03
UBP2Q01476 YOL098CYOL098C 3114 nt2.37□□□□□ -2.03
UBP2Q01476 MSB1YOR188W 3414 nt2.37□□□□□ -2.03
UBP2Q01476 TRM3YDL112W 4311 nt2.37□□□□□ -2.03
UBP2Q01476 UBP3YER151C 2739 nt2.36□□□□□ -2.03
UBP2Q01476 RGA1YOR127W 3024 nt2.36□□□□□ -2.03
UBP2Q01476 YLR149C-AYLR149C-A 87 nt2.36□□□□□ -2.03
UBP2Q01476 CDC60YPL160W 3273 nt2.36□□□□□ -2.03
UBP2Q01476 ALY2YJL084C 3141 nt2.35□□□□□ -2.03
UBP2Q01476 tW(CCA)G1tW(CCA)G1 72 nt2.35□□□□□ -2.03
UBP2Q01476 tW(CCA)G2tW(CCA)G2 72 nt2.35□□□□□ -2.03
UBP2Q01476 tW(CCA)JtW(CCA)J 72 nt2.35□□□□□ -2.03
UBP2Q01476 tW(CCA)KtW(CCA)K 72 nt2.35□□□□□ -2.03
UBP2Q01476 tW(CCA)MtW(CCA)M 72 nt2.35□□□□□ -2.03
UBP2Q01476 tW(CCA)PtW(CCA)P 72 nt2.35□□□□□ -2.03
UBP2Q01476 CTR9YOL145C 3234 nt2.35□□□□□ -2.03
UBP2Q01476 UFD4YKL010C 4452 nt2.35□□□□□ -2.03
UBP2Q01476 BNI1YNL271C 5862 nt2.35□□□□□ -2.03
UBP2Q01476 SCD5YOR329C 2619 nt2.34□□□□□ -2.03
UBP2Q01476 YDL073WYDL073W 2955 nt2.34□□□□□ -2.04
UBP2Q01476 RAD9YDR217C 3930 nt2.33□□□□□ -2.04
UBP2Q01476 FKS3YMR306W 5358 nt2.33□□□□□ -2.04
UBP2Q01476 MMS4YBR098W 2076 nt2.33□□□□□ -2.04
UBP2Q01476 SEC10YLR166C 2616 nt2.32□□□□□ -2.04
UBP2Q01476 AZF1YOR113W 2745 nt2.32□□□□□ -2.04
UBP2Q01476 YPR097WYPR097W 3222 nt2.32□□□□□ -2.04
UBP2Q01476 YKL225WYKL225W 348 nt2.31□□□□□ -2.04
UBP2Q01476 PDR11YIL013C 4236 nt2.31□□□□□ -2.04
UBP2Q01476 WAR1YML076C 2835 nt2.3□□□□□ -2.04
UBP2Q01476 SPO24YPR036W-A 204 nt2.3□□□□□ -2.04
UBP2Q01476 STH1YIL126W 4080 nt2.3□□□□□ -2.04
UBP2Q01476 HIR3YJR140C 4947 nt2.3□□□□□ -2.04
UBP2Q01476 TFC3YAL001C 3483 nt2.3□□□□□ -2.04
UBP2Q01476 RPL26BYGR034W 384 nt2.29□□□□□ -2.04
UBP2Q01476 RPM2YML091C 3609 nt2.29□□□□□ -2.04
UBP2Q01476 PIK1YNL267W 3201 nt2.29□□□□□ -2.04
UBP2Q01476 SYH1YPL105C 2550 nt2.28□□□□□ -2.04
UBP2Q01476 GCN2YDR283C 4980 nt2.28□□□□□ -2.04
UBP2Q01476 DNA2YHR164C 4569 nt2.27□□□□□ -2.05
UBP2Q01476 MBB1YJL199C 327 nt2.27□□□□□ -2.05
UBP2Q01476 YLR419WYLR419W 4308 nt2.27□□□□□ -2.05
UBP2Q01476 SSD1YDR293C 3753 nt2.26□□□□□ -2.05
UBP2Q01476 PAN2YGL094C 3348 nt2.26□□□□□ -2.05
UBP2Q01476 GIP3YPL137C 3831 nt2.26□□□□□ -2.05
UBP2Q01476 NUT1YGL151W 3399 nt2.26□□□□□ -2.05
UBP2Q01476 IRE1YHR079C 3348 nt2.25□□□□□ -2.05
UBP2Q01476 TUS1YLR425W 3924 nt2.24□□□□□ -2.05
UBP2Q01476 NNF2YGR089W 2811 nt2.24□□□□□ -2.05
UBP2Q01476 MYO2YOR326W 4725 nt2.23□□□□□ -2.05
UBP2Q01476 NAB6YML117W 3405 nt2.23□□□□□ -2.05
UBP2Q01476 RAV1YJR033C 4074 nt2.23□□□□□ -2.05
UBP2Q01476 YAR009CYAR009C 3591 nt2.23□□□□□ -2.05
UBP2Q01476 SEC16YPL085W 6588 nt2.22□□□□□ -2.05
UBP2Q01476 YJL052C-AYJL052C-A 120 nt2.22□□□□□ -2.05
UBP2Q01476 DGR1YNL130C-A 147 nt2.22□□□□□ -2.05
UBP2Q01476 YBR200W-AYBR200W-A 165 nt2.22□□□□□ -2.05
UBP2Q01476 SLN1YIL147C 3663 nt2.21□□□□□ -2.06
UBP2Q01476 SFB2YNL049C 2631 nt2.21□□□□□ -2.06
UBP2Q01476 SPP41YDR464W 4308 nt2.21□□□□□ -2.06
UBP2Q01476 snR190snR190 190 nt2.2□□□□□ -2.06
UBP2Q01476 GYP5YPL249C 2685 nt2.19□□□□□ -2.06
UBP2Q01476 PET309YLR067C 2898 nt2.19□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms