Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC14.23□□□□□ -0.13
UBE2D3P61077 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
UBE2D3P61077 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.23□□□□□ -0.13
UBE2D3P61077 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC14.22□□□□□ -0.13
UBE2D3P61077 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D3P61077 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBE2D3P61077 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.22□□□□□ -0.13
UBE2D3P61077 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
UBE2D3P61077 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D3P61077 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D3P61077 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.22□□□□□ -0.13
UBE2D3P61077 KRT18P61-201ENST00000585825 1298 ntBASIC14.22□□□□□ -0.13
UBE2D3P61077 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
UBE2D3P61077 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
UBE2D3P61077 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC14.22□□□□□ -0.13
UBE2D3P61077 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
UBE2D3P61077 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBE2D3P61077 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2D3P61077 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.21□□□□□ -0.13
UBE2D3P61077 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
UBE2D3P61077 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2D3P61077 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC14.21□□□□□ -0.13
UBE2D3P61077 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 AC004408.2-201ENST00000623613 2777 ntBASIC14.21□□□□□ -0.13
UBE2D3P61077 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
UBE2D3P61077 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2D3P61077 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.21□□□□□ -0.13
UBE2D3P61077 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
UBE2D3P61077 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
UBE2D3P61077 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBE2D3P61077 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D3P61077 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D3P61077 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D3P61077 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.21□□□□□ -0.14
UBE2D3P61077 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.21□□□□□ -0.14
UBE2D3P61077 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.21□□□□□ -0.14
UBE2D3P61077 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBE2D3P61077 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2D3P61077 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2D3P61077 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2D3P61077 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 PGM5P4-201ENST00000421970 445 ntBASIC14.2□□□□□ -0.14
UBE2D3P61077 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2D3P61077 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.2□□□□□ -0.14
UBE2D3P61077 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBE2D3P61077 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.2□□□□□ -0.14
UBE2D3P61077 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 AP000974.1-201ENST00000623909 2387 ntBASIC14.2□□□□□ -0.14
UBE2D3P61077 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2D3P61077 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2D3P61077 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
UBE2D3P61077 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
UBE2D3P61077 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBE2D3P61077 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.2□□□□□ -0.14
UBE2D3P61077 DPP3P2-201ENST00000416030 1696 ntBASIC14.2□□□□□ -0.14
UBE2D3P61077 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2D3P61077 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC14.19□□□□□ -0.14
UBE2D3P61077 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D3P61077 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2D3P61077 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC14.19□□□□□ -0.14
UBE2D3P61077 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D3P61077 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
UBE2D3P61077 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
UBE2D3P61077 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms