Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN18P56856 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN18P56856 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN18P56856 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
CLDN18P56856 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.91■□□□□ 0.46
CLDN18P56856 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN18P56856 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.91■□□□□ 0.46
CLDN18P56856 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CLDN18P56856 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.91■□□□□ 0.46
CLDN18P56856 AL023875.1-201ENST00000640777 796 ntBASIC17.91■□□□□ 0.46
CLDN18P56856 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 SMG8-203ENST00000578922 2178 ntBASIC17.91■□□□□ 0.46
CLDN18P56856 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
CLDN18P56856 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN18P56856 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN18P56856 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CLDN18P56856 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN18P56856 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN18P56856 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CLDN18P56856 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN18P56856 AC239809.2-201ENST00000415381 517 ntBASIC17.9■□□□□ 0.46
CLDN18P56856 UBE2SP1-201ENST00000450587 669 ntBASIC17.9■□□□□ 0.46
CLDN18P56856 AC133681.1-201ENST00000465482 601 ntBASIC17.9■□□□□ 0.46
CLDN18P56856 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN18P56856 AC093827.2-201ENST00000512654 315 ntBASIC17.9■□□□□ 0.46
CLDN18P56856 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN18P56856 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN18P56856 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.9■□□□□ 0.46
CLDN18P56856 AC124016.1-201ENST00000609552 612 ntBASIC17.9■□□□□ 0.46
CLDN18P56856 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN18P56856 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN18P56856 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN18P56856 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN18P56856 AC020907.5-201ENST00000624372 1936 ntBASIC17.9■□□□□ 0.46
CLDN18P56856 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.89■□□□□ 0.46
CLDN18P56856 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.89■□□□□ 0.46
CLDN18P56856 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN18P56856 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CLDN18P56856 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN18P56856 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 AC073314.1-201ENST00000568729 2216 ntBASIC17.89■□□□□ 0.45
CLDN18P56856 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN18P56856 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.89■□□□□ 0.45
CLDN18P56856 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.89■□□□□ 0.45
CLDN18P56856 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN18P56856 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN18P56856 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLDN18P56856 AL121906.2-201ENST00000621597 723 ntBASIC17.89■□□□□ 0.45
CLDN18P56856 AP006294.2-201ENST00000641667 209 ntBASIC17.89■□□□□ 0.45
CLDN18P56856 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.89■□□□□ 0.45
CLDN18P56856 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CLDN18P56856 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN18P56856 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLDN18P56856 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CLDN18P56856 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLDN18P56856 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN18P56856 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN18P56856 PRKY-204ENST00000533551 1019 ntBASIC17.88■□□□□ 0.45
CLDN18P56856 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CLDN18P56856 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN18P56856 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN18P56856 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN18P56856 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms