Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH13P55290 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 KRT18P5-201ENST00000436075 1291 ntBASIC19.57■□□□□ 0.72
CDH13P55290 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.57■□□□□ 0.72
CDH13P55290 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.57■□□□□ 0.72
CDH13P55290 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.57■□□□□ 0.72
CDH13P55290 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDH13P55290 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CDH13P55290 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.57■□□□□ 0.72
CDH13P55290 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 AC087289.5-201ENST00000586076 3175 ntBASIC19.56■□□□□ 0.72
CDH13P55290 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CDH13P55290 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH13P55290 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH13P55290 KRT18P11-201ENST00000435214 1283 ntBASIC19.56■□□□□ 0.72
CDH13P55290 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
CDH13P55290 MFSD11-216ENST00000590393 1141 ntBASIC19.56■□□□□ 0.72
CDH13P55290 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.56■□□□□ 0.72
CDH13P55290 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.56■□□□□ 0.72
CDH13P55290 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CDH13P55290 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDH13P55290 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH13P55290 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.55■□□□□ 0.72
CDH13P55290 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 AC007322.4-201ENST00000509611 723 ntBASIC19.55■□□□□ 0.72
CDH13P55290 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CDH13P55290 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.55■□□□□ 0.72
CDH13P55290 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
CDH13P55290 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDH13P55290 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.55■□□□□ 0.72
CDH13P55290 TMEM179-206ENST00000616017 1645 ntBASIC19.54■□□□□ 0.72
CDH13P55290 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.54■□□□□ 0.72
CDH13P55290 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH13P55290 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDH13P55290 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH13P55290 AL162412.1-201ENST00000567129 965 ntBASIC19.54■□□□□ 0.72
CDH13P55290 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.54■□□□□ 0.72
CDH13P55290 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 AC011767.1-201ENST00000617410 1153 ntBASIC19.54■□□□□ 0.72
CDH13P55290 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH13P55290 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.54■□□□□ 0.72
CDH13P55290 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.54■□□□□ 0.72
CDH13P55290 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDH13P55290 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CDH13P55290 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CDH13P55290 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH13P55290 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDH13P55290 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH13P55290 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CDH13P55290 CNN2P6-201ENST00000439038 900 ntBASIC19.53■□□□□ 0.72
CDH13P55290 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.53■□□□□ 0.72
CDH13P55290 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.53■□□□□ 0.72
CDH13P55290 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.53■□□□□ 0.72
CDH13P55290 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CDH13P55290 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDH13P55290 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CDH13P55290 AC016769.1-201ENST00000409132 1010 ntBASIC19.52■□□□□ 0.72
CDH13P55290 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms