Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH11P55287 AC104771.1-201ENST00000603335 964 ntBASIC18.3■□□□□ 0.52
CDH11P55287 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH11P55287 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH11P55287 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH11P55287 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH11P55287 AC116562.4-201ENST00000641316 2276 ntBASIC18.29■□□□□ 0.52
CDH11P55287 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 AC245052.3-201ENST00000450182 901 ntBASIC18.29■□□□□ 0.52
CDH11P55287 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH11P55287 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 KRT18P20-201ENST00000548986 1279 ntBASIC18.29■□□□□ 0.52
CDH11P55287 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.29■□□□□ 0.52
CDH11P55287 AL109923.1-201ENST00000618799 583 ntBASIC18.29■□□□□ 0.52
CDH11P55287 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH11P55287 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH11P55287 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH11P55287 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH11P55287 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH11P55287 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH11P55287 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 AL355802.2-201ENST00000402069 882 ntBASIC18.28■□□□□ 0.52
CDH11P55287 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.28■□□□□ 0.52
CDH11P55287 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH11P55287 DUX4L16-201ENST00000555130 1264 ntBASIC18.28■□□□□ 0.52
CDH11P55287 MIR2861-201ENST00000636310 90 ntBASIC18.28■□□□□ 0.52
CDH11P55287 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CDH11P55287 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CDH11P55287 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.28■□□□□ 0.52
CDH11P55287 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH11P55287 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH11P55287 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH11P55287 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH11P55287 GPX1P1-201ENST00000388829 606 ntBASIC18.27■□□□□ 0.52
CDH11P55287 NCF1B-203ENST00000435988 1254 ntBASIC18.27■□□□□ 0.52
CDH11P55287 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH11P55287 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH11P55287 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.27■□□□□ 0.52
CDH11P55287 AC005181.1-201ENST00000604782 1256 ntBASIC18.27■□□□□ 0.52
CDH11P55287 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.27■□□□□ 0.52
CDH11P55287 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDH11P55287 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH11P55287 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDH11P55287 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.26■□□□□ 0.51
CDH11P55287 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CDH11P55287 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
CDH11P55287 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.26■□□□□ 0.51
CDH11P55287 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.26■□□□□ 0.51
CDH11P55287 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CDH11P55287 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms