Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.86■□□□□ 0.77
CLNS1AP54105 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.86■□□□□ 0.77
CLNS1AP54105 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.86■□□□□ 0.77
CLNS1AP54105 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.86■□□□□ 0.77
CLNS1AP54105 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CLNS1AP54105 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLNS1AP54105 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLNS1AP54105 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLNS1AP54105 AL049812.1-201ENST00000432563 2267 ntBASIC19.85■□□□□ 0.77
CLNS1AP54105 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLNS1AP54105 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLNS1AP54105 EDA-201ENST00000338901 1233 ntBASIC19.85■□□□□ 0.77
CLNS1AP54105 MIR572-201ENST00000384983 95 ntBASIC19.85■□□□□ 0.77
CLNS1AP54105 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.85■□□□□ 0.77
CLNS1AP54105 PBX2P1-201ENST00000493219 1291 ntBASIC19.85■□□□□ 0.77
CLNS1AP54105 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.85■□□□□ 0.77
CLNS1AP54105 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
CLNS1AP54105 AL032819.2-201ENST00000624543 2162 ntBASIC19.85■□□□□ 0.77
CLNS1AP54105 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLNS1AP54105 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
CLNS1AP54105 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLNS1AP54105 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLNS1AP54105 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.85■□□□□ 0.77
CLNS1AP54105 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.85■□□□□ 0.77
CLNS1AP54105 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CLNS1AP54105 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 AC008406.3-201ENST00000620001 1374 ntBASIC19.84■□□□□ 0.77
CLNS1AP54105 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.84■□□□□ 0.77
CLNS1AP54105 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CLNS1AP54105 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.84■□□□□ 0.77
CLNS1AP54105 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CLNS1AP54105 AC096631.2-201ENST00000436136 790 ntBASIC19.84■□□□□ 0.77
CLNS1AP54105 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.84■□□□□ 0.77
CLNS1AP54105 AC106739.1-201ENST00000617035 715 ntBASIC19.84■□□□□ 0.77
CLNS1AP54105 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.84■□□□□ 0.77
CLNS1AP54105 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.84■□□□□ 0.77
CLNS1AP54105 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CLNS1AP54105 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLNS1AP54105 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLNS1AP54105 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLNS1AP54105 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLNS1AP54105 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLNS1AP54105 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLNS1AP54105 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CLNS1AP54105 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLNS1AP54105 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.83■□□□□ 0.77
CLNS1AP54105 AP001330.3-201ENST00000520123 633 ntBASIC19.83■□□□□ 0.77
CLNS1AP54105 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.83■□□□□ 0.77
CLNS1AP54105 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.83■□□□□ 0.77
CLNS1AP54105 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.83■□□□□ 0.76
CLNS1AP54105 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLNS1AP54105 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLNS1AP54105 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLNS1AP54105 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLNS1AP54105 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLNS1AP54105 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLNS1AP54105 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CLNS1AP54105 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLNS1AP54105 RASA4CP-201ENST00000424092 1398 ntBASIC19.83■□□□□ 0.76
CLNS1AP54105 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.82■□□□□ 0.76
CLNS1AP54105 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 AC093503.3-201ENST00000624917 2352 ntBASIC19.82■□□□□ 0.76
CLNS1AP54105 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.82■□□□□ 0.76
CLNS1AP54105 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.82■□□□□ 0.76
CLNS1AP54105 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLNS1AP54105 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLNS1AP54105 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLNS1AP54105 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms