Protein–RNA interactions for Protein: P53854

CWC25, Pre-mRNA-splicing factor CWC25, yeastyeast

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CWC25P53854 YLL020CYLL020C 306 nt1.1□□□□□ -2.23
CWC25P53854 YOL155W-AYOL155W-A 135 nt1.1□□□□□ -2.23
CWC25P53854 SGF11YPL047W 300 nt1.1□□□□□ -2.23
CWC25P53854 tH(GUG)E1tH(GUG)E1 72 nt1.08□□□□□ -2.24
CWC25P53854 tH(GUG)E2tH(GUG)E2 72 nt1.08□□□□□ -2.24
CWC25P53854 tH(GUG)G1tH(GUG)G1 72 nt1.08□□□□□ -2.24
CWC25P53854 tH(GUG)G2tH(GUG)G2 72 nt1.08□□□□□ -2.24
CWC25P53854 tH(GUG)HtH(GUG)H 72 nt1.08□□□□□ -2.24
CWC25P53854 tH(GUG)KtH(GUG)K 72 nt1.08□□□□□ -2.24
CWC25P53854 tH(GUG)MtH(GUG)M 72 nt1.08□□□□□ -2.24
CWC25P53854 YDR354C-AYDR354C-A 144 nt1.06□□□□□ -2.24
CWC25P53854 YLL019W-AYLL019W-A 93 nt1.06□□□□□ -2.24
CWC25P53854 STB6YKL072W 2301 nt1.06□□□□□ -2.24
CWC25P53854 EAF1YDR359C 2949 nt1.05□□□□□ -2.24
CWC25P53854 WAR1YML076C 2835 nt1.05□□□□□ -2.24
CWC25P53854 NUP145YGL092W 3954 nt1.05□□□□□ -2.24
CWC25P53854 ROM2YLR371W 4071 nt1.04□□□□□ -2.24
CWC25P53854 GEA2YEL022W 4380 nt1.04□□□□□ -2.24
CWC25P53854 OLI1Q0130 231 nt1.04□□□□□ -2.24
CWC25P53854 EMT1tM(CAU)D 73 nt1.04□□□□□ -2.24
CWC25P53854 EMT5tM(CAU)J1 73 nt1.04□□□□□ -2.24
CWC25P53854 EMT3tM(CAU)J2 73 nt1.04□□□□□ -2.24
CWC25P53854 EMT4tM(CAU)M 73 nt1.04□□□□□ -2.24
CWC25P53854 EMT2tM(CAU)O2 73 nt1.04□□□□□ -2.24
CWC25P53854 YIR030W-AYIR030W-A 384 nt1.04□□□□□ -2.24
CWC25P53854 YOR072W-BYOR072W-B 162 nt1.04□□□□□ -2.24
CWC25P53854 YOR302WYOR302W 78 nt1.04□□□□□ -2.24
CWC25P53854 YBR200W-AYBR200W-A 165 nt1.04□□□□□ -2.24
CWC25P53854 YLR422WYLR422W 5799 nt1.04□□□□□ -2.24
CWC25P53854 YJL026C-AYJL026C-A 222 nt1.03□□□□□ -2.24
CWC25P53854 YNL211CYNL211C 261 nt1.03□□□□□ -2.24
CWC25P53854 NUP192YJL039C 5052 nt1.03□□□□□ -2.24
CWC25P53854 FIG2YCR089W 4830 nt1.02□□□□□ -2.25
CWC25P53854 YBR182C-AYBR182C-A 195 nt1.02□□□□□ -2.25
CWC25P53854 BEM2YER155C 6504 nt1.01□□□□□ -2.25
CWC25P53854 YKU70YMR284W 1809 nt1.01□□□□□ -2.25
CWC25P53854 YJR029WYJR029W 5268 nt1□□□□□ -2.25
CWC25P53854 YPR137C-BYPR137C-B 5268 nt1□□□□□ -2.25
CWC25P53854 SMC1YFL008W 3678 nt1□□□□□ -2.25
CWC25P53854 YDL196WYDL196W 330 nt1□□□□□ -2.25
CWC25P53854 NUP157YER105C 4176 nt0.99□□□□□ -2.25
CWC25P53854 CMC4YMR194C-B 222 nt0.98□□□□□ -2.25
CWC25P53854 SPG3YDR504C 384 nt0.97□□□□□ -2.25
CWC25P53854 YFR012W-AYFR012W-A 87 nt0.97□□□□□ -2.25
CWC25P53854 YAL067W-AYAL067W-A 228 nt0.97□□□□□ -2.25
CWC25P53854 YOR345CYOR345C 351 nt0.97□□□□□ -2.25
CWC25P53854 NOP9YJL010C 2001 nt0.96□□□□□ -2.26
CWC25P53854 PAA1YDR071C 576 nt0.96□□□□□ -2.26
CWC25P53854 JLP2YMR132C 627 nt0.96□□□□□ -2.26
CWC25P53854 YBR131C-AYBR131C-A 90 nt0.96□□□□□ -2.26
CWC25P53854 SEC3YER008C 4011 nt0.96□□□□□ -2.26
CWC25P53854 SPT7YBR081C 3999 nt0.96□□□□□ -2.26
CWC25P53854 TTI1YKL033W 3117 nt0.95□□□□□ -2.26
CWC25P53854 YDL185C-AYDL185C-A 228 nt0.95□□□□□ -2.26
CWC25P53854 APQ12YIL040W 417 nt0.95□□□□□ -2.26
CWC25P53854 YNL097C-BYNL097C-B 123 nt0.95□□□□□ -2.26
CWC25P53854 ASE1YOR058C 2658 nt0.95□□□□□ -2.26
CWC25P53854 SCC2YDR180W 4482 nt0.94□□□□□ -2.26
CWC25P53854 ISD11YER048W-A 285 nt0.94□□□□□ -2.26
CWC25P53854 ANS1YHR126C 480 nt0.94□□□□□ -2.26
CWC25P53854 YIL134C-AYIL134C-A 204 nt0.93□□□□□ -2.26
CWC25P53854 RPS30BYOR182C 192 nt0.93□□□□□ -2.26
CWC25P53854 YPL044CYPL044C 549 nt0.93□□□□□ -2.26
CWC25P53854 BLI1YKL061W 342 nt0.91□□□□□ -2.26
CWC25P53854 COX12YLR038C 252 nt0.91□□□□□ -2.26
CWC25P53854 KAP120YPL125W 3099 nt0.91□□□□□ -2.26
CWC25P53854 ULI1YFR026C 510 nt0.9□□□□□ -2.27
CWC25P53854 PAM16YJL104W 450 nt0.9□□□□□ -2.27
CWC25P53854 COY1YKL179C 2040 nt0.89□□□□□ -2.27
CWC25P53854 BFR2YDR299W 1605 nt0.89□□□□□ -2.27
CWC25P53854 DOP1YDR141C 5097 nt0.88□□□□□ -2.27
CWC25P53854 SIP4YJL089W 2490 nt0.88□□□□□ -2.27
CWC25P53854 LAA1YJL207C 6045 nt0.88□□□□□ -2.27
CWC25P53854 YCR018C-AYCR018C-A 255 nt0.88□□□□□ -2.27
CWC25P53854 RPL26BYGR034W 384 nt0.88□□□□□ -2.27
CWC25P53854 YMR046W-AYMR046W-A 129 nt0.88□□□□□ -2.27
CWC25P53854 YOR161W-AYOR161W-A 81 nt0.88□□□□□ -2.27
CWC25P53854 MSH3YCR092C 3057 nt0.87□□□□□ -2.27
CWC25P53854 tM(CAU)Q1tM(CAU)Q1 76 nt0.87□□□□□ -2.27
CWC25P53854 tV(UAC)BtV(UAC)B 74 nt0.87□□□□□ -2.27
CWC25P53854 tV(UAC)DtV(UAC)D 74 nt0.87□□□□□ -2.27
CWC25P53854 PMP1YCR024C-A 123 nt0.86□□□□□ -2.27
CWC25P53854 YCR038W-AYCR038W-A 126 nt0.86□□□□□ -2.27
CWC25P53854 YGL123C-AYGL123C-A 231 nt0.86□□□□□ -2.27
CWC25P53854 YLR282CYLR282C 342 nt0.86□□□□□ -2.27
CWC25P53854 CLU1YMR012W 3834 nt0.86□□□□□ -2.27
CWC25P53854 HAL9YOL089C 3093 nt0.85□□□□□ -2.27
CWC25P53854 YDR406W-AYDR406W-A 246 nt0.85□□□□□ -2.27
CWC25P53854 snR190snR190 190 nt0.85□□□□□ -2.27
CWC25P53854 RKR1YMR247C 4689 nt0.84□□□□□ -2.27
CWC25P53854 BUD3YCL014W 4911 nt0.84□□□□□ -2.28
CWC25P53854 YER053C-AYER053C-A 114 nt0.83□□□□□ -2.28
CWC25P53854 COX5BYIL111W 456 nt0.83□□□□□ -2.28
CWC25P53854 YGR130CYGR130C 2451 nt0.83□□□□□ -2.28
CWC25P53854 YEL014CYEL014C 306 nt0.82□□□□□ -2.28
CWC25P53854 YIL002W-AYIL002W-A 210 nt0.82□□□□□ -2.28
CWC25P53854 snR46snR46 197 nt0.81□□□□□ -2.28
CWC25P53854 YPR160W-AYPR160W-A 81 nt0.8□□□□□ -2.28
CWC25P53854 PRP16YKR086W 3216 nt0.8□□□□□ -2.28
CWC25P53854 YDL073WYDL073W 2955 nt0.8□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 32.6 ms