Protein–RNA interactions for Protein: P52917

VPS4, Vacuolar protein sorting-associated protein 4, yeastyeast

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS4P52917 APL3YBL037W 3078 nt1.38□□□□□ -2.19
VPS4P52917 PDE2YOR360C 1581 nt1.38□□□□□ -2.19
VPS4P52917 YOR011W-AYOR011W-A 207 nt1.38□□□□□ -2.19
VPS4P52917 YOR015WYOR015W 360 nt1.38□□□□□ -2.19
VPS4P52917 YAR009CYAR009C 3591 nt1.37□□□□□ -2.19
VPS4P52917 YNL284C-BYNL284C-B 5268 nt1.37□□□□□ -2.19
VPS4P52917 YLL020CYLL020C 306 nt1.37□□□□□ -2.19
VPS4P52917 YLR120W-AYLR120W-A 102 nt1.37□□□□□ -2.19
VPS4P52917 IES4YOR189W 351 nt1.37□□□□□ -2.19
VPS4P52917 PAN2YGL094C 3348 nt1.37□□□□□ -2.19
VPS4P52917 CLU1YMR012W 3834 nt1.35□□□□□ -2.19
VPS4P52917 MSN5YDR335W 3675 nt1.35□□□□□ -2.19
VPS4P52917 YJL197C-AYJL197C-A 282 nt1.35□□□□□ -2.19
VPS4P52917 NUP145YGL092W 3954 nt1.34□□□□□ -2.19
VPS4P52917 YGL052WYGL052W 306 nt1.34□□□□□ -2.19
VPS4P52917 YHR063W-AYHR063W-A 336 nt1.34□□□□□ -2.19
VPS4P52917 YMR172C-AYMR172C-A 384 nt1.34□□□□□ -2.19
VPS4P52917 RPL33BYOR234C 324 nt1.34□□□□□ -2.19
VPS4P52917 ECM12YHR021W-A 456 nt1.33□□□□□ -2.2
VPS4P52917 YBR064WYBR064W 429 nt1.33□□□□□ -2.2
VPS4P52917 VAM6YDL077C 3150 nt1.32□□□□□ -2.2
VPS4P52917 MYO1YHR023W 5787 nt1.32□□□□□ -2.2
VPS4P52917 YBR200W-AYBR200W-A 165 nt1.32□□□□□ -2.2
VPS4P52917 snR49snR49 165 nt1.32□□□□□ -2.2
VPS4P52917 PAM16YJL104W 450 nt1.31□□□□□ -2.2
VPS4P52917 RRT15YLR162W-A 189 nt1.31□□□□□ -2.2
VPS4P52917 WAR1YML076C 2835 nt1.31□□□□□ -2.2
VPS4P52917 MCM10YIL150C 1716 nt1.31□□□□□ -2.2
VPS4P52917 APL1YJR005W 2103 nt1.31□□□□□ -2.2
VPS4P52917 CDC39YCR093W 6327 nt1.31□□□□□ -2.2
VPS4P52917 YPR092WYPR092W 306 nt1.3□□□□□ -2.2
VPS4P52917 EAF1YDR359C 2949 nt1.3□□□□□ -2.2
VPS4P52917 SMC1YFL008W 3678 nt1.29□□□□□ -2.2
VPS4P52917 STB6YKL072W 2301 nt1.29□□□□□ -2.2
VPS4P52917 SGF11YPL047W 300 nt1.28□□□□□ -2.2
VPS4P52917 OLI1Q0130 231 nt1.27□□□□□ -2.21
VPS4P52917 SEC3YER008C 4011 nt1.27□□□□□ -2.21
VPS4P52917 GEA2YEL022W 4380 nt1.26□□□□□ -2.21
VPS4P52917 snR8snR8 190 nt1.26□□□□□ -2.21
VPS4P52917 YGL188C-AYGL188C-A 141 nt1.26□□□□□ -2.21
VPS4P52917 YMR307C-AYMR307C-A 195 nt1.25□□□□□ -2.21
VPS4P52917 snR55snR55 98 nt1.24□□□□□ -2.21
VPS4P52917 snR74snR74 88 nt1.24□□□□□ -2.21
VPS4P52917 YGL041CYGL041C 204 nt1.23□□□□□ -2.21
VPS4P52917 YOL155W-AYOL155W-A 135 nt1.23□□□□□ -2.21
VPS4P52917 NUP157YER105C 4176 nt1.22□□□□□ -2.21
VPS4P52917 YDR354C-AYDR354C-A 144 nt1.22□□□□□ -2.21
VPS4P52917 YLL019W-AYLL019W-A 93 nt1.22□□□□□ -2.21
VPS4P52917 YOR072W-BYOR072W-B 162 nt1.22□□□□□ -2.21
VPS4P52917 BUD3YCL014W 4911 nt1.22□□□□□ -2.21
VPS4P52917 BEM2YER155C 6504 nt1.21□□□□□ -2.22
VPS4P52917 YNL211CYNL211C 261 nt1.21□□□□□ -2.22
VPS4P52917 YOL014WYOL014W 375 nt1.21□□□□□ -2.22
VPS4P52917 SPT7YBR081C 3999 nt1.21□□□□□ -2.22
VPS4P52917 YDR366CYDR366C 399 nt1.2□□□□□ -2.22
VPS4P52917 ABF2YMR072W 552 nt1.2□□□□□ -2.22
VPS4P52917 tF(GAA)QtF(GAA)Q 75 nt1.19□□□□□ -2.22
VPS4P52917 CMC4YMR194C-B 222 nt1.19□□□□□ -2.22
VPS4P52917 NOP9YJL010C 2001 nt1.18□□□□□ -2.22
VPS4P52917 YJR029WYJR029W 5268 nt1.17□□□□□ -2.22
VPS4P52917 YPR137C-BYPR137C-B 5268 nt1.17□□□□□ -2.22
VPS4P52917 snR80snR80 171 nt1.17□□□□□ -2.22
VPS4P52917 PAA1YDR071C 576 nt1.16□□□□□ -2.22
VPS4P52917 YJL026C-AYJL026C-A 222 nt1.16□□□□□ -2.22
VPS4P52917 YPL044CYPL044C 549 nt1.16□□□□□ -2.22
VPS4P52917 YBR182C-AYBR182C-A 195 nt1.15□□□□□ -2.23
VPS4P52917 NPR2YEL062W 1848 nt1.15□□□□□ -2.23
VPS4P52917 YDL196WYDL196W 330 nt1.14□□□□□ -2.23
VPS4P52917 YIL142C-AYIL142C-A 333 nt1.14□□□□□ -2.23
VPS4P52917 YIR030W-AYIR030W-A 384 nt1.14□□□□□ -2.23
VPS4P52917 YAL067W-AYAL067W-A 228 nt1.14□□□□□ -2.23
VPS4P52917 YPR117WYPR117W 7470 nt1.13□□□□□ -2.23
VPS4P52917 YKU70YMR284W 1809 nt1.13□□□□□ -2.23
VPS4P52917 ISD11YER048W-A 285 nt1.12□□□□□ -2.23
VPS4P52917 EMT1tM(CAU)D 73 nt1.12□□□□□ -2.23
VPS4P52917 EMT5tM(CAU)J1 73 nt1.12□□□□□ -2.23
VPS4P52917 EMT3tM(CAU)J2 73 nt1.12□□□□□ -2.23
VPS4P52917 EMT4tM(CAU)M 73 nt1.12□□□□□ -2.23
VPS4P52917 EMT2tM(CAU)O2 73 nt1.12□□□□□ -2.23
VPS4P52917 UBP3YER151C 2739 nt1.11□□□□□ -2.23
VPS4P52917 YFR012W-AYFR012W-A 87 nt1.1□□□□□ -2.23
VPS4P52917 RPL26BYGR034W 384 nt1.1□□□□□ -2.23
VPS4P52917 KAP120YPL125W 3099 nt1.09□□□□□ -2.23
VPS4P52917 YCR018C-AYCR018C-A 255 nt1.08□□□□□ -2.24
VPS4P52917 YDL185C-AYDL185C-A 228 nt1.08□□□□□ -2.24
VPS4P52917 YMR158W-BYMR158W-B 321 nt1.08□□□□□ -2.24
VPS4P52917 ASE1YOR058C 2658 nt1.07□□□□□ -2.24
VPS4P52917 YOR302WYOR302W 78 nt1.07□□□□□ -2.24
VPS4P52917 UTP20YBL004W 7482 nt1.06□□□□□ -2.24
VPS4P52917 YKL145W-AYKL145W-A 93 nt1.06□□□□□ -2.24
VPS4P52917 BFR2YDR299W 1605 nt1.06□□□□□ -2.24
VPS4P52917 YOR345CYOR345C 351 nt1.05□□□□□ -2.24
VPS4P52917 COY1YKL179C 2040 nt1.05□□□□□ -2.24
VPS4P52917 PMP1YCR024C-A 123 nt1.03□□□□□ -2.24
VPS4P52917 ULI1YFR026C 510 nt1.03□□□□□ -2.24
VPS4P52917 YBR131C-AYBR131C-A 90 nt1.02□□□□□ -2.25
VPS4P52917 YGL123C-AYGL123C-A 231 nt1.01□□□□□ -2.25
VPS4P52917 YLR282CYLR282C 342 nt1.01□□□□□ -2.25
VPS4P52917 snR190snR190 190 nt1.01□□□□□ -2.25
VPS4P52917 YMR160WYMR160W 2451 nt1□□□□□ -2.25
Retrieved 100 of 7,029 protein–RNA pairs in 118.7 ms