Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF140P52738 AC097658.1-201ENST00000475555 843 ntBASIC19.98■□□□□ 0.79
ZNF140P52738 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.98■□□□□ 0.79
ZNF140P52738 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ZNF140P52738 AC133041.1-202ENST00000642053 222 ntBASIC19.98■□□□□ 0.79
ZNF140P52738 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF140P52738 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.98■□□□□ 0.79
ZNF140P52738 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF140P52738 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF140P52738 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF140P52738 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ZNF140P52738 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
ZNF140P52738 PCDHAC2-203ENST00000615316 3011 ntBASIC19.97■□□□□ 0.79
ZNF140P52738 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF140P52738 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF140P52738 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF140P52738 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
ZNF140P52738 KRT16P6-202ENST00000425692 1426 ntBASIC19.97■□□□□ 0.79
ZNF140P52738 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF140P52738 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ZNF140P52738 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF140P52738 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.97■□□□□ 0.79
ZNF140P52738 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF140P52738 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF140P52738 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
ZNF140P52738 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF140P52738 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.97■□□□□ 0.79
ZNF140P52738 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.97■□□□□ 0.79
ZNF140P52738 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
ZNF140P52738 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ZNF140P52738 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF140P52738 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ZNF140P52738 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF140P52738 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.96■□□□□ 0.79
ZNF140P52738 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.96■□□□□ 0.79
ZNF140P52738 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.96■□□□□ 0.79
ZNF140P52738 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
ZNF140P52738 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ZNF140P52738 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
ZNF140P52738 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
ZNF140P52738 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
ZNF140P52738 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF140P52738 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.95■□□□□ 0.78
ZNF140P52738 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF140P52738 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.95■□□□□ 0.78
ZNF140P52738 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.95■□□□□ 0.78
ZNF140P52738 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.95■□□□□ 0.78
ZNF140P52738 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
ZNF140P52738 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.95■□□□□ 0.78
ZNF140P52738 AC005829.2-201ENST00000571422 1056 ntBASIC19.95■□□□□ 0.78
ZNF140P52738 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF140P52738 SLC25A24-204ENST00000569674 2357 ntBASIC19.95■□□□□ 0.78
ZNF140P52738 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ZNF140P52738 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ZNF140P52738 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
ZNF140P52738 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF140P52738 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.94■□□□□ 0.78
ZNF140P52738 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF140P52738 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.94■□□□□ 0.78
ZNF140P52738 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.94■□□□□ 0.78
ZNF140P52738 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 HLA-B-256ENST00000639848 1089 ntBASIC19.94■□□□□ 0.78
ZNF140P52738 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.94■□□□□ 0.78
ZNF140P52738 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ZNF140P52738 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF140P52738 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.93■□□□□ 0.78
ZNF140P52738 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.93■□□□□ 0.78
ZNF140P52738 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ZNF140P52738 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms