Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 AC099778.1-201ENST00000568593 1911 ntBASIC19.1■□□□□ 0.65
HLCSP50747 AC007225.1-201ENST00000566331 1836 ntBASIC19.1■□□□□ 0.65
HLCSP50747 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.1■□□□□ 0.65
HLCSP50747 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.1■□□□□ 0.65
HLCSP50747 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.1■□□□□ 0.65
HLCSP50747 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.1■□□□□ 0.65
HLCSP50747 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.1■□□□□ 0.65
HLCSP50747 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HLCSP50747 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 AC116562.4-201ENST00000641316 2276 ntBASIC19.1■□□□□ 0.65
HLCSP50747 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.1■□□□□ 0.65
HLCSP50747 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
HLCSP50747 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLCSP50747 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.09■□□□□ 0.65
HLCSP50747 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.09■□□□□ 0.65
HLCSP50747 AC010980.2-201ENST00000587099 1412 ntBASIC19.09■□□□□ 0.65
HLCSP50747 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.09■□□□□ 0.65
HLCSP50747 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.09■□□□□ 0.65
HLCSP50747 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.09■□□□□ 0.65
HLCSP50747 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 BX276092.2-201ENST00000417668 665 ntBASIC19.09■□□□□ 0.65
HLCSP50747 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.09■□□□□ 0.65
HLCSP50747 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 FAM21FP-204ENST00000608637 956 ntBASIC19.09■□□□□ 0.65
HLCSP50747 AC092118.2-201ENST00000613495 667 ntBASIC19.09■□□□□ 0.65
HLCSP50747 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.09■□□□□ 0.65
HLCSP50747 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLCSP50747 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLCSP50747 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLCSP50747 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.08■□□□□ 0.65
HLCSP50747 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLCSP50747 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLCSP50747 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.08■□□□□ 0.65
HLCSP50747 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLCSP50747 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HLCSP50747 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLCSP50747 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.08■□□□□ 0.64
HLCSP50747 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.08■□□□□ 0.64
HLCSP50747 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.08■□□□□ 0.64
HLCSP50747 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.08■□□□□ 0.64
HLCSP50747 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
HLCSP50747 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.08■□□□□ 0.64
HLCSP50747 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.08■□□□□ 0.64
HLCSP50747 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
HLCSP50747 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLCSP50747 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLCSP50747 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLCSP50747 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.07■□□□□ 0.64
HLCSP50747 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
HLCSP50747 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.07■□□□□ 0.64
HLCSP50747 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.07■□□□□ 0.64
HLCSP50747 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.07■□□□□ 0.64
HLCSP50747 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.07■□□□□ 0.64
HLCSP50747 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.07■□□□□ 0.64
HLCSP50747 CD99P1-205ENST00000527459 561 ntBASIC19.07■□□□□ 0.64
HLCSP50747 KRT18P6-201ENST00000555540 1265 ntBASIC19.07■□□□□ 0.64
HLCSP50747 AC098934.4-201ENST00000564127 592 ntBASIC19.07■□□□□ 0.64
HLCSP50747 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.07■□□□□ 0.64
HLCSP50747 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HLCSP50747 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.07■□□□□ 0.64
HLCSP50747 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLCSP50747 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLCSP50747 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.06■□□□□ 0.64
HLCSP50747 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLCSP50747 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLCSP50747 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.06■□□□□ 0.64
HLCSP50747 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLCSP50747 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms