Protein–RNA interactions for Protein: P49954

NIT3, Omega-amidase NIT3, yeastyeast

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NIT3P49954 TRM732YMR259C 4263 nt1.83□□□□□ -2.12
NIT3P49954 APL1YJR005W 2103 nt1.81□□□□□ -2.12
NIT3P49954 tT(UGU)HtT(UGU)H 72 nt1.81□□□□□ -2.12
NIT3P49954 YBL053WYBL053W 375 nt1.81□□□□□ -2.12
NIT3P49954 YBR221W-AYBR221W-A 105 nt1.81□□□□□ -2.12
NIT3P49954 KIP1YBL063W 3336 nt1.81□□□□□ -2.12
NIT3P49954 PRP42YDR235W 1635 nt1.8□□□□□ -2.12
NIT3P49954 TTI1YKL033W 3117 nt1.8□□□□□ -2.12
NIT3P49954 SMC4YLR086W 4257 nt1.8□□□□□ -2.12
NIT3P49954 MMS4YBR098W 2076 nt1.79□□□□□ -2.12
NIT3P49954 YAL067W-AYAL067W-A 228 nt1.79□□□□□ -2.12
NIT3P49954 PEP1YBL017C 4740 nt1.79□□□□□ -2.12
NIT3P49954 GYP5YPL249C 2685 nt1.78□□□□□ -2.12
NIT3P49954 YLR422WYLR422W 5799 nt1.78□□□□□ -2.12
NIT3P49954 YCR038W-AYCR038W-A 126 nt1.78□□□□□ -2.12
NIT3P49954 YAR009CYAR009C 3591 nt1.78□□□□□ -2.13
NIT3P49954 YHR214C-BYHR214C-B 5382 nt1.77□□□□□ -2.13
NIT3P49954 COA6YMR244C-A 315 nt1.77□□□□□ -2.13
NIT3P49954 YIL002W-AYIL002W-A 210 nt1.75□□□□□ -2.13
NIT3P49954 YNL211CYNL211C 261 nt1.75□□□□□ -2.13
NIT3P49954 FKS1YLR342W 5631 nt1.74□□□□□ -2.13
NIT3P49954 PKH3YDR466W 2697 nt1.74□□□□□ -2.13
NIT3P49954 SNU13YEL026W 381 nt1.72□□□□□ -2.13
NIT3P49954 YLL054CYLL054C 2532 nt1.72□□□□□ -2.13
NIT3P49954 SET3YKR029C 2256 nt1.71□□□□□ -2.13
NIT3P49954 SAC3YDR159W 3906 nt1.71□□□□□ -2.14
NIT3P49954 FAB1YFR019W 6837 nt1.7□□□□□ -2.14
NIT3P49954 Q0143Q0143 153 nt1.69□□□□□ -2.14
NIT3P49954 STO1YMR125W 2586 nt1.69□□□□□ -2.14
NIT3P49954 PMD1YER132C 5262 nt1.68□□□□□ -2.14
NIT3P49954 MYO2YOR326W 4725 nt1.68□□□□□ -2.14
NIT3P49954 APL3YBL037W 3078 nt1.68□□□□□ -2.14
NIT3P49954 YER053C-AYER053C-A 114 nt1.68□□□□□ -2.14
NIT3P49954 SWI4YER111C 3282 nt1.68□□□□□ -2.14
NIT3P49954 IRC20YLR247C 4671 nt1.67□□□□□ -2.14
NIT3P49954 YGL123C-AYGL123C-A 231 nt1.67□□□□□ -2.14
NIT3P49954 YIL020C-AYIL020C-A 339 nt1.67□□□□□ -2.14
NIT3P49954 RSM22YKL155C 1887 nt1.67□□□□□ -2.14
NIT3P49954 VPS15YBR097W 4365 nt1.66□□□□□ -2.14
NIT3P49954 snR48snR48 113 nt1.66□□□□□ -2.14
NIT3P49954 BST1YFL025C 3090 nt1.65□□□□□ -2.14
NIT3P49954 YOR102WYOR102W 351 nt1.65□□□□□ -2.15
NIT3P49954 PRP5YBR237W 2550 nt1.64□□□□□ -2.15
NIT3P49954 EAF1YDR359C 2949 nt1.64□□□□□ -2.15
NIT3P49954 YFR012W-AYFR012W-A 87 nt1.64□□□□□ -2.15
NIT3P49954 CMC4YMR194C-B 222 nt1.64□□□□□ -2.15
NIT3P49954 YOR161W-AYOR161W-A 81 nt1.64□□□□□ -2.15
NIT3P49954 BFR2YDR299W 1605 nt1.64□□□□□ -2.15
NIT3P49954 ASE1YOR058C 2658 nt1.63□□□□□ -2.15
NIT3P49954 SEC3YER008C 4011 nt1.63□□□□□ -2.15
NIT3P49954 NOP9YJL010C 2001 nt1.63□□□□□ -2.15
NIT3P49954 YHL015W-AYHL015W-A 84 nt1.63□□□□□ -2.15
NIT3P49954 COX5BYIL111W 456 nt1.63□□□□□ -2.15
NIT3P49954 CDC31YOR257W 486 nt1.63□□□□□ -2.15
NIT3P49954 CFT1YDR301W 4074 nt1.62□□□□□ -2.15
NIT3P49954 NUP188YML103C 4968 nt1.62□□□□□ -2.15
NIT3P49954 CDC39YCR093W 6327 nt1.61□□□□□ -2.15
NIT3P49954 YOR019WYOR019W 2193 nt1.61□□□□□ -2.15
NIT3P49954 NUP157YER105C 4176 nt1.6□□□□□ -2.15
NIT3P49954 YLR282CYLR282C 342 nt1.6□□□□□ -2.15
NIT3P49954 WAR1YML076C 2835 nt1.6□□□□□ -2.15
NIT3P49954 YKL100W-AYKL100W-A 90 nt1.59□□□□□ -2.15
NIT3P49954 YMR272W-BYMR272W-B 108 nt1.59□□□□□ -2.15
NIT3P49954 YOR314W-AYOR314W-A 111 nt1.59□□□□□ -2.15
NIT3P49954 EST2YLR318W 2655 nt1.59□□□□□ -2.16
NIT3P49954 PIK1YNL267W 3201 nt1.59□□□□□ -2.16
NIT3P49954 RTP1YMR185W 2946 nt1.58□□□□□ -2.16
NIT3P49954 NUP145YGL092W 3954 nt1.58□□□□□ -2.16
NIT3P49954 tL(UAA)QtL(UAA)Q 85 nt1.58□□□□□ -2.16
NIT3P49954 YLR041WYLR041W 321 nt1.58□□□□□ -2.16
NIT3P49954 YGL182CYGL182C 324 nt1.57□□□□□ -2.16
NIT3P49954 STB6YKL072W 2301 nt1.56□□□□□ -2.16
NIT3P49954 YLL020CYLL020C 306 nt1.56□□□□□ -2.16
NIT3P49954 YBR200W-AYBR200W-A 165 nt1.56□□□□□ -2.16
NIT3P49954 CDC25YLR310C 4770 nt1.55□□□□□ -2.16
NIT3P49954 CHS1YNL192W 3396 nt1.55□□□□□ -2.16
NIT3P49954 SMC1YFL008W 3678 nt1.55□□□□□ -2.16
NIT3P49954 YBL039C-AYBL039C-A 84 nt1.55□□□□□ -2.16
NIT3P49954 ROM2YLR371W 4071 nt1.55□□□□□ -2.16
NIT3P49954 AZF1YOR113W 2745 nt1.54□□□□□ -2.16
NIT3P49954 MSN5YDR335W 3675 nt1.53□□□□□ -2.16
NIT3P49954 REV3YPL167C 4515 nt1.53□□□□□ -2.16
NIT3P49954 YML002WYML002W 2214 nt1.53□□□□□ -2.16
NIT3P49954 SSK2YNR031C 4740 nt1.53□□□□□ -2.16
NIT3P49954 KAP120YPL125W 3099 nt1.53□□□□□ -2.17
NIT3P49954 snR190snR190 190 nt1.52□□□□□ -2.17
NIT3P49954 UTP8YGR128C 2142 nt1.52□□□□□ -2.17
NIT3P49954 RPL26BYGR034W 384 nt1.51□□□□□ -2.17
NIT3P49954 GEA2YEL022W 4380 nt1.5□□□□□ -2.17
NIT3P49954 CLU1YMR012W 3834 nt1.5□□□□□ -2.17
NIT3P49954 SXM1YDR395W 2835 nt1.49□□□□□ -2.17
NIT3P49954 SPC110YDR356W 2835 nt1.48□□□□□ -2.17
NIT3P49954 TAH1YCR060W 336 nt1.48□□□□□ -2.17
NIT3P49954 YNL205CYNL205C 423 nt1.48□□□□□ -2.17
NIT3P49954 YCL001W-BYCL001W-B 255 nt1.48□□□□□ -2.17
NIT3P49954 CHS6YJL099W 2241 nt1.48□□□□□ -2.17
NIT3P49954 PET127YOR017W 2403 nt1.48□□□□□ -2.17
NIT3P49954 FYV10YIL097W 1551 nt1.47□□□□□ -2.17
NIT3P49954 FYV8YGR196C 2454 nt1.46□□□□□ -2.18
NIT3P49954 PRP16YKR086W 3216 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms