Protein–RNA interactions for Protein: P48743

RFX1, RFX-like DNA-binding protein RFX1, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFX1P48743 UFD2YDL190C 2886 nt1.67□□□□□ -2.14
RFX1P48743 PAA1YDR071C 576 nt1.67□□□□□ -2.14
RFX1P48743 RPS30BYOR182C 192 nt1.67□□□□□ -2.14
RFX1P48743 YIL134C-AYIL134C-A 204 nt1.66□□□□□ -2.14
RFX1P48743 COA6YMR244C-A 315 nt1.66□□□□□ -2.14
RFX1P48743 MMS4YBR098W 2076 nt1.66□□□□□ -2.14
RFX1P48743 BRR2YER172C 6492 nt1.66□□□□□ -2.14
RFX1P48743 PAN2YGL094C 3348 nt1.66□□□□□ -2.14
RFX1P48743 TBS1YBR150C 3285 nt1.65□□□□□ -2.14
RFX1P48743 PKH3YDR466W 2697 nt1.65□□□□□ -2.14
RFX1P48743 TTI1YKL033W 3117 nt1.65□□□□□ -2.14
RFX1P48743 SNU13YEL026W 381 nt1.65□□□□□ -2.15
RFX1P48743 COX12YLR038C 252 nt1.65□□□□□ -2.15
RFX1P48743 YPL044CYPL044C 549 nt1.65□□□□□ -2.15
RFX1P48743 PRP42YDR235W 1635 nt1.65□□□□□ -2.15
RFX1P48743 SLX4YLR135W 2247 nt1.64□□□□□ -2.15
RFX1P48743 YLL054CYLL054C 2532 nt1.64□□□□□ -2.15
RFX1P48743 KCS1YDR017C 3153 nt1.63□□□□□ -2.15
RFX1P48743 DNF3YMR162C 4971 nt1.63□□□□□ -2.15
RFX1P48743 MON2YNL297C 4911 nt1.63□□□□□ -2.15
RFX1P48743 YNL211CYNL211C 261 nt1.63□□□□□ -2.15
RFX1P48743 YCS4YLR272C 3531 nt1.62□□□□□ -2.15
RFX1P48743 YCR038W-AYCR038W-A 126 nt1.62□□□□□ -2.15
RFX1P48743 SMC4YLR086W 4257 nt1.62□□□□□ -2.15
RFX1P48743 CTF4YPR135W 2784 nt1.61□□□□□ -2.15
RFX1P48743 MDS3YGL197W 4464 nt1.61□□□□□ -2.15
RFX1P48743 YJL022WYJL022W 309 nt1.61□□□□□ -2.15
RFX1P48743 CAT8YMR280C 4302 nt1.6□□□□□ -2.15
RFX1P48743 YAL067W-AYAL067W-A 228 nt1.6□□□□□ -2.15
RFX1P48743 POL5YEL055C 3069 nt1.6□□□□□ -2.15
RFX1P48743 IRA1YBR140C 9279 nt1.59□□□□□ -2.15
RFX1P48743 YIL002W-AYIL002W-A 210 nt1.59□□□□□ -2.15
RFX1P48743 NUP192YJL039C 5052 nt1.59□□□□□ -2.16
RFX1P48743 RSM22YKL155C 1887 nt1.58□□□□□ -2.16
RFX1P48743 YAR009CYAR009C 3591 nt1.58□□□□□ -2.16
RFX1P48743 snR14snR14 160 nt1.58□□□□□ -2.16
RFX1P48743 SMC1YFL008W 3678 nt1.58□□□□□ -2.16
RFX1P48743 YHL015W-AYHL015W-A 84 nt1.57□□□□□ -2.16
RFX1P48743 YBL053WYBL053W 375 nt1.57□□□□□ -2.16
RFX1P48743 YLR422WYLR422W 5799 nt1.56□□□□□ -2.16
RFX1P48743 Q0143Q0143 153 nt1.56□□□□□ -2.16
RFX1P48743 YOR102WYOR102W 351 nt1.56□□□□□ -2.16
RFX1P48743 YLR419WYLR419W 4308 nt1.56□□□□□ -2.16
RFX1P48743 PET127YOR017W 2403 nt1.54□□□□□ -2.16
RFX1P48743 tQ(UUG)E2tQ(UUG)E2 72 nt1.54□□□□□ -2.16
RFX1P48743 YIL020C-AYIL020C-A 339 nt1.54□□□□□ -2.16
RFX1P48743 PRP5YBR237W 2550 nt1.54□□□□□ -2.16
RFX1P48743 KAP122YGL016W 3246 nt1.54□□□□□ -2.16
RFX1P48743 YGL123C-AYGL123C-A 231 nt1.53□□□□□ -2.16
RFX1P48743 YKL100W-AYKL100W-A 90 nt1.53□□□□□ -2.16
RFX1P48743 YOR314W-AYOR314W-A 111 nt1.52□□□□□ -2.17
RFX1P48743 YOR019WYOR019W 2193 nt1.52□□□□□ -2.17
RFX1P48743 STO1YMR125W 2586 nt1.52□□□□□ -2.17
RFX1P48743 YER053C-AYER053C-A 114 nt1.51□□□□□ -2.17
RFX1P48743 CDC31YOR257W 486 nt1.51□□□□□ -2.17
RFX1P48743 SET3YKR029C 2256 nt1.51□□□□□ -2.17
RFX1P48743 EAF1YDR359C 2949 nt1.5□□□□□ -2.17
RFX1P48743 CHS1YNL192W 3396 nt1.5□□□□□ -2.17
RFX1P48743 FYV8YGR196C 2454 nt1.5□□□□□ -2.17
RFX1P48743 UTP8YGR128C 2142 nt1.49□□□□□ -2.17
RFX1P48743 BST1YFL025C 3090 nt1.49□□□□□ -2.17
RFX1P48743 snR48snR48 113 nt1.49□□□□□ -2.17
RFX1P48743 CCH1YGR217W 6120 nt1.48□□□□□ -2.17
RFX1P48743 PMD1YER132C 5262 nt1.48□□□□□ -2.17
RFX1P48743 ANS1YHR126C 480 nt1.48□□□□□ -2.17
RFX1P48743 COX5BYIL111W 456 nt1.48□□□□□ -2.17
RFX1P48743 CMC4YMR194C-B 222 nt1.48□□□□□ -2.17
RFX1P48743 SWI4YER111C 3282 nt1.48□□□□□ -2.17
RFX1P48743 WAR1YML076C 2835 nt1.47□□□□□ -2.17
RFX1P48743 BFR2YDR299W 1605 nt1.47□□□□□ -2.17
RFX1P48743 NOP9YJL010C 2001 nt1.47□□□□□ -2.17
RFX1P48743 SPC110YDR356W 2835 nt1.47□□□□□ -2.17
RFX1P48743 MSH3YCR092C 3057 nt1.46□□□□□ -2.18
RFX1P48743 YLL020CYLL020C 306 nt1.46□□□□□ -2.18
RFX1P48743 YOR161W-AYOR161W-A 81 nt1.46□□□□□ -2.18
RFX1P48743 SXM1YDR395W 2835 nt1.46□□□□□ -2.18
RFX1P48743 YLR282CYLR282C 342 nt1.45□□□□□ -2.18
RFX1P48743 APL3YBL037W 3078 nt1.45□□□□□ -2.18
RFX1P48743 NUP145YGL092W 3954 nt1.44□□□□□ -2.18
RFX1P48743 YNL205CYNL205C 423 nt1.44□□□□□ -2.18
RFX1P48743 CDC25YLR310C 4770 nt1.44□□□□□ -2.18
RFX1P48743 PIK1YNL267W 3201 nt1.44□□□□□ -2.18
RFX1P48743 YML002WYML002W 2214 nt1.43□□□□□ -2.18
RFX1P48743 FIG2YCR089W 4830 nt1.43□□□□□ -2.18
RFX1P48743 SSK2YNR031C 4740 nt1.43□□□□□ -2.18
RFX1P48743 YFR012W-AYFR012W-A 87 nt1.43□□□□□ -2.18
RFX1P48743 YGL182CYGL182C 324 nt1.43□□□□□ -2.18
RFX1P48743 YBR200W-AYBR200W-A 165 nt1.43□□□□□ -2.18
RFX1P48743 ROM2YLR371W 4071 nt1.42□□□□□ -2.18
RFX1P48743 AZF1YOR113W 2745 nt1.42□□□□□ -2.18
RFX1P48743 snR85snR85 171 nt1.42□□□□□ -2.18
RFX1P48743 LAA1YJL207C 6045 nt1.42□□□□□ -2.18
RFX1P48743 YNL284C-BYNL284C-B 5268 nt1.42□□□□□ -2.18
RFX1P48743 RPL26BYGR034W 384 nt1.41□□□□□ -2.18
RFX1P48743 EST2YLR318W 2655 nt1.41□□□□□ -2.18
RFX1P48743 CHS6YJL099W 2241 nt1.4□□□□□ -2.19
RFX1P48743 TRM732YMR259C 4263 nt1.4□□□□□ -2.19
RFX1P48743 tL(UAA)QtL(UAA)Q 85 nt1.39□□□□□ -2.19
RFX1P48743 CLU1YMR012W 3834 nt1.39□□□□□ -2.19
RFX1P48743 NUP188YML103C 4968 nt1.39□□□□□ -2.19
Retrieved 100 of 7,029 protein–RNA pairs in 23.3 ms