Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 YNL067W-AYNL067W-A 147 nt-1.09□□□□□ -2.58
TY1B-JR1P47098 ATG31YDR022C 591 nt-1.1□□□□□ -2.59
TY1B-JR1P47098 YGR228WYGR228W 345 nt-1.1□□□□□ -2.59
TY1B-JR1P47098 snR51snR51 107 nt-1.1□□□□□ -2.59
TY1B-JR1P47098 APQ12YIL040W 417 nt-1.11□□□□□ -2.59
TY1B-JR1P47098 LOC1YFR001W 615 nt-1.12□□□□□ -2.59
TY1B-JR1P47098 YIL032CYIL032C 357 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 YLR041WYLR041W 321 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 RPS30AYLR287C-A 192 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 YNL146C-AYNL146C-A 195 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 YGL239CYGL239C 315 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 YLR282CYLR282C 342 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 YOR364WYOR364W 369 nt-1.13□□□□□ -2.59
TY1B-JR1P47098 SDH7YDR511W 402 nt-1.14□□□□□ -2.59
TY1B-JR1P47098 YMR254CYMR254C 309 nt-1.14□□□□□ -2.59
TY1B-JR1P47098 YBL107W-AYBL107W-A 105 nt-1.14□□□□□ -2.59
TY1B-JR1P47098 YCR100CYCR100C 951 nt-1.15□□□□□ -2.59
TY1B-JR1P47098 AGA2YGL032C 264 nt-1.15□□□□□ -2.59
TY1B-JR1P47098 YLR163W-AYLR163W-A 114 nt-1.15□□□□□ -2.59
TY1B-JR1P47098 YOR015WYOR015W 360 nt-1.15□□□□□ -2.59
TY1B-JR1P47098 YOR366WYOR366W 354 nt-1.15□□□□□ -2.59
TY1B-JR1P47098 YPR010C-AYPR010C-A 219 nt-1.15□□□□□ -2.59
TY1B-JR1P47098 YGL182CYGL182C 324 nt-1.16□□□□□ -2.59
TY1B-JR1P47098 BUD26YDR241W 288 nt-1.16□□□□□ -2.6
TY1B-JR1P47098 SPC24YMR117C 642 nt-1.18□□□□□ -2.6
TY1B-JR1P47098 SRB7YDR308C 423 nt-1.19□□□□□ -2.6
TY1B-JR1P47098 YGL015CYGL015C 393 nt-1.19□□□□□ -2.6
TY1B-JR1P47098 YLR154W-FYLR154W-F 141 nt-1.19□□□□□ -2.6
TY1B-JR1P47098 YBR072C-AYBR072C-A 162 nt-1.19□□□□□ -2.6
TY1B-JR1P47098 YPR092WYPR092W 306 nt-1.19□□□□□ -2.6
TY1B-JR1P47098 snR5snR5 204 nt-1.2□□□□□ -2.6
TY1B-JR1P47098 BLI1YKL061W 342 nt-1.2□□□□□ -2.6
TY1B-JR1P47098 snR72snR72 98 nt-1.21□□□□□ -2.6
TY1B-JR1P47098 SGF11YPL047W 300 nt-1.21□□□□□ -2.6
TY1B-JR1P47098 YMR013C-AYMR013C-A 150 nt-1.22□□□□□ -2.6
TY1B-JR1P47098 POP7YBR167C 423 nt-1.22□□□□□ -2.6
TY1B-JR1P47098 YER084W-AYER084W-A 513 nt-1.23□□□□□ -2.61
TY1B-JR1P47098 YHR130CYHR130C 336 nt-1.23□□□□□ -2.61
TY1B-JR1P47098 HMLALPHA2YCL067C 633 nt-1.24□□□□□ -2.61
TY1B-JR1P47098 MATALPHA2YCR039C 633 nt-1.24□□□□□ -2.61
TY1B-JR1P47098 HMRA2YCR096C 360 nt-1.24□□□□□ -2.61
TY1B-JR1P47098 HUR1YGL168W 333 nt-1.25□□□□□ -2.61
TY1B-JR1P47098 YPL182CYPL182C 384 nt-1.25□□□□□ -2.61
TY1B-JR1P47098 YDR220CYDR220C 294 nt-1.26□□□□□ -2.61
TY1B-JR1P47098 AIM29YKR074W 468 nt-1.26□□□□□ -2.61
TY1B-JR1P47098 YPT6YLR262C 648 nt-1.26□□□□□ -2.61
TY1B-JR1P47098 IRC13YOR235W 315 nt-1.26□□□□□ -2.61
TY1B-JR1P47098 APQ13YJL075C 417 nt-1.27□□□□□ -2.61
TY1B-JR1P47098 YFL063WYFL063W 456 nt-1.28□□□□□ -2.61
TY1B-JR1P47098 YBL062WYBL062W 381 nt-1.28□□□□□ -2.61
TY1B-JR1P47098 YDR366CYDR366C 399 nt-1.29□□□□□ -2.62
TY1B-JR1P47098 MRPL32YCR003W 552 nt-1.29□□□□□ -2.62
TY1B-JR1P47098 RPL22BYFL034C-A 369 nt-1.29□□□□□ -2.62
TY1B-JR1P47098 YJL182CYJL182C 318 nt-1.29□□□□□ -2.62
TY1B-JR1P47098 tP(UGG)QtP(UGG)Q 72 nt-1.3□□□□□ -2.62
TY1B-JR1P47098 snR49snR49 165 nt-1.3□□□□□ -2.62
TY1B-JR1P47098 YLR264C-AYLR264C-A 117 nt-1.31□□□□□ -2.62
TY1B-JR1P47098 YLR334CYLR334C 381 nt-1.31□□□□□ -2.62
TY1B-JR1P47098 CUP1-1YHR053C 186 nt-1.32□□□□□ -2.62
TY1B-JR1P47098 CUP1-2YHR055C 186 nt-1.32□□□□□ -2.62
TY1B-JR1P47098 ATG16YMR159C 453 nt-1.32□□□□□ -2.62
TY1B-JR1P47098 YNL058CYNL058C 951 nt-1.33□□□□□ -2.62
TY1B-JR1P47098 YPR039WYPR039W 336 nt-1.33□□□□□ -2.62
TY1B-JR1P47098 snR34snR34 203 nt-1.33□□□□□ -2.62
TY1B-JR1P47098 SDH6YDR379C-A 240 nt-1.34□□□□□ -2.62
TY1B-JR1P47098 SCEIQ0160 708 nt-1.34□□□□□ -2.62
TY1B-JR1P47098 YGL230CYGL230C 444 nt-1.35□□□□□ -2.63
TY1B-JR1P47098 tY(GUA)QtY(GUA)Q 84 nt-1.35□□□□□ -2.63
TY1B-JR1P47098 YOR192C-CYOR192C-C 237 nt-1.36□□□□□ -2.63
TY1B-JR1P47098 MND1YGL183C 660 nt-1.36□□□□□ -2.63
TY1B-JR1P47098 YDL011CYDL011C 324 nt-1.37□□□□□ -2.63
TY1B-JR1P47098 YCR001WYCR001W 315 nt-1.38□□□□□ -2.63
TY1B-JR1P47098 YHR007C-AYHR007C-A 216 nt-1.38□□□□□ -2.63
TY1B-JR1P47098 snR189snR189 189 nt-1.38□□□□□ -2.63
TY1B-JR1P47098 YKL083WYKL083W 615 nt-1.39□□□□□ -2.63
TY1B-JR1P47098 FYV7YLR068W 456 nt-1.39□□□□□ -2.63
TY1B-JR1P47098 YOR161W-AYOR161W-A 81 nt-1.4□□□□□ -2.63
TY1B-JR1P47098 YER135CYER135C 393 nt-1.41□□□□□ -2.63
TY1B-JR1P47098 YGR270C-AYGR270C-A 219 nt-1.41□□□□□ -2.63
TY1B-JR1P47098 TSC3YBR058C-A 243 nt-1.41□□□□□ -2.63
TY1B-JR1P47098 YGL052WYGL052W 306 nt-1.42□□□□□ -2.64
TY1B-JR1P47098 YAR029WYAR029W 225 nt-1.43□□□□□ -2.64
TY1B-JR1P47098 ZEO1YOL109W 342 nt-1.43□□□□□ -2.64
TY1B-JR1P47098 YNL303WYNL303W 348 nt-1.44□□□□□ -2.64
TY1B-JR1P47098 YPL068CYPL068C 882 nt-1.44□□□□□ -2.64
TY1B-JR1P47098 YGR025WYGR025W 303 nt-1.47□□□□□ -2.64
TY1B-JR1P47098 YKL100W-AYKL100W-A 90 nt-1.47□□□□□ -2.64
TY1B-JR1P47098 YDR354C-AYDR354C-A 144 nt-1.47□□□□□ -2.65
TY1B-JR1P47098 YER175W-AYER175W-A 165 nt-1.47□□□□□ -2.65
TY1B-JR1P47098 YPR002C-AYPR002C-A 198 nt-1.47□□□□□ -2.65
TY1B-JR1P47098 YLR217WYLR217W 324 nt-1.48□□□□□ -2.65
TY1B-JR1P47098 YDR426CYDR426C 378 nt-1.49□□□□□ -2.65
TY1B-JR1P47098 YER053C-AYER053C-A 114 nt-1.49□□□□□ -2.65
TY1B-JR1P47098 YBR285WYBR285W 435 nt-1.5□□□□□ -2.65
TY1B-JR1P47098 SKI7YOR076C 2244 nt-1.51□□□□□ -2.65
TY1B-JR1P47098 snR81snR81 201 nt-1.51□□□□□ -2.65
TY1B-JR1P47098 YJR087WYJR087W 351 nt-1.52□□□□□ -2.65
TY1B-JR1P47098 YOR170WYOR170W 306 nt-1.52□□□□□ -2.65
TY1B-JR1P47098 YPL229WYPL229W 621 nt-1.53□□□□□ -2.65
TY1B-JR1P47098 YFR009W-AYFR009W-A 258 nt-1.54□□□□□ -2.66
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms