Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR1P43307 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.23■□□□□ 0.99
SSR1P43307 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SSR1P43307 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.23■□□□□ 0.99
SSR1P43307 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SSR1P43307 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 AC011767.1-201ENST00000617410 1153 ntBASIC21.23■□□□□ 0.99
SSR1P43307 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
SSR1P43307 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SSR1P43307 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.22■□□□□ 0.99
SSR1P43307 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.22■□□□□ 0.99
SSR1P43307 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.22■□□□□ 0.99
SSR1P43307 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 PGM5P4-201ENST00000421970 445 ntBASIC21.22■□□□□ 0.99
SSR1P43307 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.22■□□□□ 0.99
SSR1P43307 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC21.22■□□□□ 0.99
SSR1P43307 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.22■□□□□ 0.99
SSR1P43307 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.22■□□□□ 0.99
SSR1P43307 AC016405.3-201ENST00000607710 860 ntBASIC21.22■□□□□ 0.99
SSR1P43307 MIR5787-201ENST00000611784 55 ntBASIC21.22■□□□□ 0.99
SSR1P43307 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.22■□□□□ 0.99
SSR1P43307 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SSR1P43307 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.22■□□□□ 0.99
SSR1P43307 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SSR1P43307 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.22■□□□□ 0.99
SSR1P43307 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SSR1P43307 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.21■□□□□ 0.99
SSR1P43307 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SSR1P43307 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SSR1P43307 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 AL162430.1-201ENST00000480705 870 ntBASIC21.21■□□□□ 0.99
SSR1P43307 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.21■□□□□ 0.99
SSR1P43307 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.21■□□□□ 0.99
SSR1P43307 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
SSR1P43307 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
SSR1P43307 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SSR1P43307 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SSR1P43307 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SSR1P43307 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SSR1P43307 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.2■□□□□ 0.98
SSR1P43307 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.2■□□□□ 0.98
SSR1P43307 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.2■□□□□ 0.98
SSR1P43307 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.2■□□□□ 0.98
SSR1P43307 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SSR1P43307 AL356652.1-201ENST00000615962 565 ntBASIC21.2■□□□□ 0.98
SSR1P43307 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SSR1P43307 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.2■□□□□ 0.98
SSR1P43307 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SSR1P43307 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SSR1P43307 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
SSR1P43307 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SSR1P43307 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SSR1P43307 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.19■□□□□ 0.98
SSR1P43307 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.19■□□□□ 0.98
SSR1P43307 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SSR1P43307 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.19■□□□□ 0.98
SSR1P43307 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.19■□□□□ 0.98
SSR1P43307 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SSR1P43307 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms