Protein–RNA interactions for Protein: P40959

MVP1, Sorting nexin MVP1, yeastyeast

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MVP1P40959 YER138CYER138C 5268 nt2.7□□□□□ -1.98
MVP1P40959 YER160CYER160C 5268 nt2.7□□□□□ -1.98
MVP1P40959 YGR038C-BYGR038C-B 5268 nt2.7□□□□□ -1.98
MVP1P40959 YGR161C-DYGR161C-D 5268 nt2.7□□□□□ -1.98
MVP1P40959 YJR027WYJR027W 5268 nt2.7□□□□□ -1.98
MVP1P40959 YLR157C-BYLR157C-B 5268 nt2.7□□□□□ -1.98
MVP1P40959 YML039WYML039W 5268 nt2.7□□□□□ -1.98
MVP1P40959 YML045WYML045W 5268 nt2.7□□□□□ -1.98
MVP1P40959 YMR050CYMR050C 5268 nt2.7□□□□□ -1.98
MVP1P40959 YOL103W-BYOL103W-B 5268 nt2.7□□□□□ -1.98
MVP1P40959 YBR012W-BYBR012W-B 5271 nt2.7□□□□□ -1.98
MVP1P40959 YOR142W-BYOR142W-B 5268 nt2.7□□□□□ -1.98
MVP1P40959 YPL257W-BYPL257W-B 5268 nt2.7□□□□□ -1.98
MVP1P40959 YPR158W-BYPR158W-B 5271 nt2.7□□□□□ -1.98
MVP1P40959 YOL098CYOL098C 3114 nt2.69□□□□□ -1.98
MVP1P40959 SFB2YNL049C 2631 nt2.69□□□□□ -1.98
MVP1P40959 MYO2YOR326W 4725 nt2.69□□□□□ -1.98
MVP1P40959 YOL164W-AYOL164W-A 183 nt2.69□□□□□ -1.98
MVP1P40959 TOF1YNL273W 3717 nt2.69□□□□□ -1.98
MVP1P40959 CHC1YGL206C 4962 nt2.69□□□□□ -1.98
MVP1P40959 YOR343W-BYOR343W-B 5313 nt2.68□□□□□ -1.98
MVP1P40959 SMC1YFL008W 3678 nt2.68□□□□□ -1.98
MVP1P40959 DNA2YHR164C 4569 nt2.68□□□□□ -1.98
MVP1P40959 PAN2YGL094C 3348 nt2.68□□□□□ -1.98
MVP1P40959 RPS26AYGL189C 360 nt2.68□□□□□ -1.98
MVP1P40959 TOP2YNL088W 4287 nt2.68□□□□□ -1.98
MVP1P40959 GIP3YPL137C 3831 nt2.68□□□□□ -1.98
MVP1P40959 tW(CCA)G1tW(CCA)G1 72 nt2.67□□□□□ -1.98
MVP1P40959 tW(CCA)G2tW(CCA)G2 72 nt2.67□□□□□ -1.98
MVP1P40959 tW(CCA)JtW(CCA)J 72 nt2.67□□□□□ -1.98
MVP1P40959 tW(CCA)KtW(CCA)K 72 nt2.67□□□□□ -1.98
MVP1P40959 tW(CCA)MtW(CCA)M 72 nt2.67□□□□□ -1.98
MVP1P40959 tW(CCA)PtW(CCA)P 72 nt2.67□□□□□ -1.98
MVP1P40959 YLR041WYLR041W 321 nt2.67□□□□□ -1.98
MVP1P40959 YBR196C-AYBR196C-A 150 nt2.67□□□□□ -1.98
MVP1P40959 BNR1YIL159W 4128 nt2.66□□□□□ -1.98
MVP1P40959 ALY2YJL084C 3141 nt2.66□□□□□ -1.98
MVP1P40959 YBL005W-BYBL005W-B 5268 nt2.65□□□□□ -1.98
MVP1P40959 TDA9YML081W 3756 nt2.65□□□□□ -1.99
MVP1P40959 NUM1YDR150W 8247 nt2.65□□□□□ -1.99
MVP1P40959 FYV10YIL097W 1551 nt2.64□□□□□ -1.99
MVP1P40959 RPM2YML091C 3609 nt2.64□□□□□ -1.99
MVP1P40959 PDR3YBL005W 2931 nt2.64□□□□□ -1.99
MVP1P40959 NUT1YGL151W 3399 nt2.64□□□□□ -1.99
MVP1P40959 GYP5YPL249C 2685 nt2.64□□□□□ -1.99
MVP1P40959 MMS4YBR098W 2076 nt2.63□□□□□ -1.99
MVP1P40959 UFD4YKL010C 4452 nt2.63□□□□□ -1.99
MVP1P40959 RTT101YJL047C 2529 nt2.62□□□□□ -1.99
MVP1P40959 SLN1YIL147C 3663 nt2.62□□□□□ -1.99
MVP1P40959 RAV1YJR033C 4074 nt2.62□□□□□ -1.99
MVP1P40959 DNF1YER166W 4716 nt2.62□□□□□ -1.99
MVP1P40959 UTP21YLR409C 2820 nt2.61□□□□□ -1.99
MVP1P40959 KRE33YNL132W 3171 nt2.6□□□□□ -1.99
MVP1P40959 HIR3YJR140C 4947 nt2.6□□□□□ -1.99
MVP1P40959 RAD9YDR217C 3930 nt2.6□□□□□ -1.99
MVP1P40959 FKS3YMR306W 5358 nt2.59□□□□□ -1.99
MVP1P40959 NUP157YER105C 4176 nt2.59□□□□□ -1.99
MVP1P40959 YPR097WYPR097W 3222 nt2.59□□□□□ -1.99
MVP1P40959 SGS1YMR190C 4344 nt2.59□□□□□ -2
MVP1P40959 snR70snR70 164 nt2.58□□□□□ -2
MVP1P40959 YAR009CYAR009C 3591 nt2.57□□□□□ -2
MVP1P40959 TRA1YHR099W 11235 nt2.57□□□□□ -2
MVP1P40959 snR47snR47 99 nt2.55□□□□□ -2
MVP1P40959 RAD50YNL250W 3939 nt2.55□□□□□ -2
MVP1P40959 RGA1YOR127W 3024 nt2.54□□□□□ -2
MVP1P40959 snR64snR64 101 nt2.54□□□□□ -2
MVP1P40959 TIM9YEL020W-A 264 nt2.54□□□□□ -2
MVP1P40959 ROM2YLR371W 4071 nt2.54□□□□□ -2
MVP1P40959 GLG1YKR058W 1851 nt2.53□□□□□ -2
MVP1P40959 MSB1YOR188W 3414 nt2.53□□□□□ -2
MVP1P40959 MSH6YDR097C 3729 nt2.52□□□□□ -2.01
MVP1P40959 EMC5YIL027C 426 nt2.52□□□□□ -2.01
MVP1P40959 KIP1YBL063W 3336 nt2.52□□□□□ -2.01
MVP1P40959 PSD2YGR170W 3417 nt2.51□□□□□ -2.01
MVP1P40959 YJL052C-AYJL052C-A 120 nt2.51□□□□□ -2.01
MVP1P40959 snR190snR190 190 nt2.51□□□□□ -2.01
MVP1P40959 NOP9YJL010C 2001 nt2.51□□□□□ -2.01
MVP1P40959 CHS1YNL192W 3396 nt2.5□□□□□ -2.01
MVP1P40959 HER1YOR227W 3741 nt2.49□□□□□ -2.01
MVP1P40959 YLR286W-AYLR286W-A 135 nt2.49□□□□□ -2.01
MVP1P40959 INO80YGL150C 4470 nt2.49□□□□□ -2.01
MVP1P40959 SEC10YLR166C 2616 nt2.49□□□□□ -2.01
MVP1P40959 HSL1YKL101W 4557 nt2.48□□□□□ -2.01
MVP1P40959 RPL26BYGR034W 384 nt2.48□□□□□ -2.01
MVP1P40959 SCD5YOR329C 2619 nt2.48□□□□□ -2.01
MVP1P40959 UBP2YOR124C 3819 nt2.48□□□□□ -2.01
MVP1P40959 PDR11YIL013C 4236 nt2.47□□□□□ -2.01
MVP1P40959 snR50snR50 90 nt2.47□□□□□ -2.01
MVP1P40959 IRA2YOL081W 9240 nt2.45□□□□□ -2.02
MVP1P40959 KOG1YHR186C 4674 nt2.45□□□□□ -2.02
MVP1P40959 WAR1YML076C 2835 nt2.45□□□□□ -2.02
MVP1P40959 ASE1YOR058C 2658 nt2.45□□□□□ -2.02
MVP1P40959 ORC3YLL004W 1851 nt2.45□□□□□ -2.02
MVP1P40959 YBR200W-AYBR200W-A 165 nt2.44□□□□□ -2.02
MVP1P40959 TFC3YAL001C 3483 nt2.43□□□□□ -2.02
MVP1P40959 DGR1YNL130C-A 147 nt2.42□□□□□ -2.02
MVP1P40959 CSF1YLR087C 8877 nt2.41□□□□□ -2.02
MVP1P40959 YBR109W-AYBR109W-A 225 nt2.41□□□□□ -2.02
MVP1P40959 MYO4YAL029C 4416 nt2.4□□□□□ -2.03
MVP1P40959 YLR422WYLR422W 5799 nt2.39□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms