Protein–RNA interactions for Protein: P39944

UBP5, Ubiquitin carboxyl-terminal hydrolase 5, yeastyeast

Predictions only

Length 805 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP5P39944 YBL100W-CYBL100W-C 120 nt2.21□□□□□ -2.06
UBP5P39944 YOL164W-AYOL164W-A 183 nt2.21□□□□□ -2.06
UBP5P39944 BFR2YDR299W 1605 nt2.2□□□□□ -2.06
UBP5P39944 APL1YJR005W 2103 nt2.2□□□□□ -2.06
UBP5P39944 ACB1YGR037C 264 nt2.2□□□□□ -2.06
UBP5P39944 RPS29AYLR388W 171 nt2.2□□□□□ -2.06
UBP5P39944 GYP5YPL249C 2685 nt2.2□□□□□ -2.06
UBP5P39944 EAF1YDR359C 2949 nt2.19□□□□□ -2.06
UBP5P39944 BNI1YNL271C 5862 nt2.19□□□□□ -2.06
UBP5P39944 YCR102W-AYCR102W-A 198 nt2.19□□□□□ -2.06
UBP5P39944 YBR109W-AYBR109W-A 225 nt2.19□□□□□ -2.06
UBP5P39944 AMS1YGL156W 3252 nt2.18□□□□□ -2.06
UBP5P39944 SEC1YDR164C 2175 nt2.18□□□□□ -2.06
UBP5P39944 TAH1YCR060W 336 nt2.18□□□□□ -2.06
UBP5P39944 snR50snR50 90 nt2.18□□□□□ -2.06
UBP5P39944 ORC3YLL004W 1851 nt2.18□□□□□ -2.06
UBP5P39944 FIR1YER032W 2631 nt2.17□□□□□ -2.06
UBP5P39944 YHR180W-AYHR180W-A 183 nt2.16□□□□□ -2.06
UBP5P39944 YJL127W-AYJL127W-A 117 nt2.16□□□□□ -2.06
UBP5P39944 YGL123C-AYGL123C-A 231 nt2.15□□□□□ -2.07
UBP5P39944 YLR232WYLR232W 348 nt2.15□□□□□ -2.07
UBP5P39944 YOR161W-AYOR161W-A 81 nt2.15□□□□□ -2.07
UBP5P39944 snR47snR47 99 nt2.15□□□□□ -2.07
UBP5P39944 ASE1YOR058C 2658 nt2.15□□□□□ -2.07
UBP5P39944 MMS22YLR320W 4365 nt2.14□□□□□ -2.07
UBP5P39944 YDL206WYDL206W 2289 nt2.14□□□□□ -2.07
UBP5P39944 SEC16YPL085W 6588 nt2.14□□□□□ -2.07
UBP5P39944 RPL37BYDR500C 267 nt2.14□□□□□ -2.07
UBP5P39944 YER172C-AYER172C-A 381 nt2.14□□□□□ -2.07
UBP5P39944 ANS1YHR126C 480 nt2.14□□□□□ -2.07
UBP5P39944 RTT107YHR154W 3213 nt2.14□□□□□ -2.07
UBP5P39944 SIR4YDR227W 4077 nt2.13□□□□□ -2.07
UBP5P39944 IRA2YOL081W 9240 nt2.13□□□□□ -2.07
UBP5P39944 snR75snR75 89 nt2.13□□□□□ -2.07
UBP5P39944 DCP2YNL118C 2913 nt2.12□□□□□ -2.07
UBP5P39944 YLR035C-AYLR035C-A 3468 nt2.12□□□□□ -2.07
UBP5P39944 COG4YPR105C 2586 nt2.12□□□□□ -2.07
UBP5P39944 IST2YBR086C 2841 nt2.12□□□□□ -2.07
UBP5P39944 PKH2YOL100W 3246 nt2.12□□□□□ -2.07
UBP5P39944 CDC53YDL132W 2448 nt2.11□□□□□ -2.07
UBP5P39944 SAC3YDR159W 3906 nt2.11□□□□□ -2.07
UBP5P39944 SDC25YLL016W 3147 nt2.11□□□□□ -2.07
UBP5P39944 PEP1YBL017C 4740 nt2.11□□□□□ -2.07
UBP5P39944 UFD2YDL190C 2886 nt2.11□□□□□ -2.07
UBP5P39944 KOG1YHR186C 4674 nt2.1□□□□□ -2.07
UBP5P39944 TIM9YEL020W-A 264 nt2.1□□□□□ -2.07
UBP5P39944 KIP1YBL063W 3336 nt2.1□□□□□ -2.07
UBP5P39944 MAK10YEL053C 2202 nt2.09□□□□□ -2.07
UBP5P39944 NOP9YJL010C 2001 nt2.09□□□□□ -2.07
UBP5P39944 RGA1YOR127W 3024 nt2.09□□□□□ -2.08
UBP5P39944 YML002WYML002W 2214 nt2.09□□□□□ -2.08
UBP5P39944 STH1YIL126W 4080 nt2.08□□□□□ -2.08
UBP5P39944 YBR196C-AYBR196C-A 150 nt2.08□□□□□ -2.08
UBP5P39944 YOR343W-BYOR343W-B 5313 nt2.08□□□□□ -2.08
UBP5P39944 YLR286W-AYLR286W-A 135 nt2.07□□□□□ -2.08
UBP5P39944 YKL096C-BYKL096C-B 150 nt2.06□□□□□ -2.08
UBP5P39944 MLH3YPL164C 2148 nt2.06□□□□□ -2.08
UBP5P39944 USO1YDL058W 5373 nt2.05□□□□□ -2.08
UBP5P39944 INP51YIL002C 2841 nt2.04□□□□□ -2.08
UBP5P39944 CBF2YGR140W 2871 nt2.04□□□□□ -2.08
UBP5P39944 YPR097WYPR097W 3222 nt2.04□□□□□ -2.08
UBP5P39944 YGR146C-AYGR146C-A 162 nt2.04□□□□□ -2.08
UBP5P39944 GIP3YPL137C 3831 nt2.04□□□□□ -2.08
UBP5P39944 MSH5YDL154W 2706 nt2.04□□□□□ -2.08
UBP5P39944 YLR149C-AYLR149C-A 87 nt2.03□□□□□ -2.08
UBP5P39944 RTP1YMR185W 2946 nt2.02□□□□□ -2.09
UBP5P39944 SLI15YBR156C 2097 nt2.02□□□□□ -2.09
UBP5P39944 CHC1YGL206C 4962 nt2.02□□□□□ -2.09
UBP5P39944 POL5YEL055C 3069 nt2□□□□□ -2.09
UBP5P39944 BPH1YCR032W 6504 nt2□□□□□ -2.09
UBP5P39944 YKL100W-AYKL100W-A 90 nt2□□□□□ -2.09
UBP5P39944 YMR272W-BYMR272W-B 108 nt2□□□□□ -2.09
UBP5P39944 FAB1YFR019W 6837 nt2□□□□□ -2.09
UBP5P39944 YJR039WYJR039W 3366 nt1.99□□□□□ -2.09
UBP5P39944 TBS1YBR150C 3285 nt1.98□□□□□ -2.09
UBP5P39944 SEC21YNL287W 2808 nt1.98□□□□□ -2.09
UBP5P39944 MMS4YBR098W 2076 nt1.97□□□□□ -2.09
UBP5P39944 ADR1YDR216W 3972 nt1.97□□□□□ -2.09
UBP5P39944 UBR1YGR184C 5853 nt1.96□□□□□ -2.1
UBP5P39944 YKL225WYKL225W 348 nt1.96□□□□□ -2.1
UBP5P39944 AGC1YPR021C 2709 nt1.96□□□□□ -2.1
UBP5P39944 RSM22YKL155C 1887 nt1.95□□□□□ -2.1
UBP5P39944 COA6YMR244C-A 315 nt1.95□□□□□ -2.1
UBP5P39944 FKS1YLR342W 5631 nt1.94□□□□□ -2.1
UBP5P39944 SEY1YOR165W 2331 nt1.94□□□□□ -2.1
UBP5P39944 FRK1YPL141C 2598 nt1.94□□□□□ -2.1
UBP5P39944 PIK1YNL267W 3201 nt1.93□□□□□ -2.1
UBP5P39944 YLR419WYLR419W 4308 nt1.93□□□□□ -2.1
UBP5P39944 UBP3YER151C 2739 nt1.93□□□□□ -2.1
UBP5P39944 BUD2YKL092C 3315 nt1.92□□□□□ -2.1
UBP5P39944 BRR2YER172C 6492 nt1.92□□□□□ -2.1
UBP5P39944 CDC60YPL160W 3273 nt1.92□□□□□ -2.1
UBP5P39944 TRL1YJL087C 2484 nt1.92□□□□□ -2.1
UBP5P39944 YLR041WYLR041W 321 nt1.92□□□□□ -2.1
UBP5P39944 AZF1YOR113W 2745 nt1.91□□□□□ -2.1
UBP5P39944 TUS1YLR425W 3924 nt1.91□□□□□ -2.1
UBP5P39944 SEC10YLR166C 2616 nt1.91□□□□□ -2.1
UBP5P39944 HER1YOR227W 3741 nt1.9□□□□□ -2.1
UBP5P39944 VPS8YAL002W 3825 nt1.9□□□□□ -2.11
UBP5P39944 GCN2YDR283C 4980 nt1.9□□□□□ -2.11
Retrieved 100 of 7,029 protein–RNA pairs in 77.5 ms