Protein–RNA interactions for Protein: P33336

SKN1, Beta-glucan synthesis-associated protein SKN1, yeastyeast

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SKN1P33336 RPS30BYOR182C 192 nt0.97□□□□□ -2.25
SKN1P33336 YOR011W-AYOR011W-A 207 nt0.96□□□□□ -2.26
SKN1P33336 YLR120W-AYLR120W-A 102 nt0.95□□□□□ -2.26
SKN1P33336 YMR172C-AYMR172C-A 384 nt0.95□□□□□ -2.26
SKN1P33336 YMR321CYMR321C 318 nt0.95□□□□□ -2.26
SKN1P33336 CSE2YNR010W 450 nt0.95□□□□□ -2.26
SKN1P33336 YPL152W-AYPL152W-A 99 nt0.95□□□□□ -2.26
SKN1P33336 KAP120YPL125W 3099 nt0.95□□□□□ -2.26
SKN1P33336 SMC1YFL008W 3678 nt0.94□□□□□ -2.26
SKN1P33336 GEA2YEL022W 4380 nt0.93□□□□□ -2.26
SKN1P33336 OLI1Q0130 231 nt0.93□□□□□ -2.26
SKN1P33336 RPS27BYHR021C 249 nt0.93□□□□□ -2.26
SKN1P33336 PAM16YJL104W 450 nt0.93□□□□□ -2.26
SKN1P33336 VAM6YDL077C 3150 nt0.93□□□□□ -2.26
SKN1P33336 YDL196WYDL196W 330 nt0.92□□□□□ -2.26
SKN1P33336 ECM12YHR021W-A 456 nt0.92□□□□□ -2.26
SKN1P33336 YML099W-AYML099W-A 330 nt0.92□□□□□ -2.26
SKN1P33336 YNL028WYNL028W 318 nt0.92□□□□□ -2.26
SKN1P33336 IES4YOR189W 351 nt0.92□□□□□ -2.26
SKN1P33336 snR74snR74 88 nt0.91□□□□□ -2.26
SKN1P33336 ISD11YER048W-A 285 nt0.91□□□□□ -2.26
SKN1P33336 BUD3YCL014W 4911 nt0.9□□□□□ -2.26
SKN1P33336 ASE1YOR058C 2658 nt0.9□□□□□ -2.27
SKN1P33336 YGL052WYGL052W 306 nt0.9□□□□□ -2.27
SKN1P33336 YJL197C-AYJL197C-A 282 nt0.9□□□□□ -2.27
SKN1P33336 MCM10YIL150C 1716 nt0.89□□□□□ -2.27
SKN1P33336 YOR008C-AYOR008C-A 225 nt0.89□□□□□ -2.27
SKN1P33336 YOR218CYOR218C 420 nt0.88□□□□□ -2.27
SKN1P33336 YPL044CYPL044C 549 nt0.88□□□□□ -2.27
SKN1P33336 SGF11YPL047W 300 nt0.88□□□□□ -2.27
SKN1P33336 NOP9YJL010C 2001 nt0.88□□□□□ -2.27
SKN1P33336 YDR354C-AYDR354C-A 144 nt0.87□□□□□ -2.27
SKN1P33336 YGL041CYGL041C 204 nt0.87□□□□□ -2.27
SKN1P33336 CMC4YMR194C-B 222 nt0.87□□□□□ -2.27
SKN1P33336 YOR282WYOR282W 321 nt0.87□□□□□ -2.27
SKN1P33336 YPR092WYPR092W 306 nt0.87□□□□□ -2.27
SKN1P33336 BEM2YER155C 6504 nt0.86□□□□□ -2.27
SKN1P33336 SCC2YDR180W 4482 nt0.86□□□□□ -2.27
SKN1P33336 UBP3YER151C 2739 nt0.86□□□□□ -2.27
SKN1P33336 PAA1YDR071C 576 nt0.86□□□□□ -2.27
SKN1P33336 tF(GAA)QtF(GAA)Q 75 nt0.86□□□□□ -2.27
SKN1P33336 YFR012W-AYFR012W-A 87 nt0.86□□□□□ -2.27
SKN1P33336 EMT1tM(CAU)D 73 nt0.86□□□□□ -2.27
SKN1P33336 EMT5tM(CAU)J1 73 nt0.86□□□□□ -2.27
SKN1P33336 EMT3tM(CAU)J2 73 nt0.86□□□□□ -2.27
SKN1P33336 EMT4tM(CAU)M 73 nt0.86□□□□□ -2.27
SKN1P33336 EMT2tM(CAU)O2 73 nt0.86□□□□□ -2.27
SKN1P33336 YDL073WYDL073W 2955 nt0.86□□□□□ -2.27
SKN1P33336 NPR2YEL062W 1848 nt0.85□□□□□ -2.27
SKN1P33336 YCR022CYCR022C 345 nt0.85□□□□□ -2.27
SKN1P33336 YHR063W-AYHR063W-A 336 nt0.85□□□□□ -2.27
SKN1P33336 YIL142C-AYIL142C-A 333 nt0.85□□□□□ -2.27
SKN1P33336 YNL211CYNL211C 261 nt0.85□□□□□ -2.27
SKN1P33336 snR80snR80 171 nt0.84□□□□□ -2.27
SKN1P33336 YJL026C-AYJL026C-A 222 nt0.84□□□□□ -2.27
SKN1P33336 PRP16YKR086W 3216 nt0.84□□□□□ -2.28
SKN1P33336 YPR117WYPR117W 7470 nt0.84□□□□□ -2.28
SKN1P33336 PMP1YCR024C-A 123 nt0.83□□□□□ -2.28
SKN1P33336 YLL019W-AYLL019W-A 93 nt0.83□□□□□ -2.28
SKN1P33336 snR49snR49 165 nt0.83□□□□□ -2.28
SKN1P33336 PAU24YBR301W 363 nt0.83□□□□□ -2.28
SKN1P33336 BFR2YDR299W 1605 nt0.82□□□□□ -2.28
SKN1P33336 YDL185C-AYDL185C-A 228 nt0.82□□□□□ -2.28
SKN1P33336 PAU12YGR294W 363 nt0.82□□□□□ -2.28
SKN1P33336 tF(GAA)BtF(GAA)B 73 nt0.8□□□□□ -2.28
SKN1P33336 YDR366CYDR366C 399 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)FtF(GAA)F 73 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)GtF(GAA)G 73 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)H1tF(GAA)H1 73 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)H2tF(GAA)H2 73 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)MtF(GAA)M 73 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)P1tF(GAA)P1 73 nt0.8□□□□□ -2.28
SKN1P33336 tF(GAA)P2tF(GAA)P2 73 nt0.8□□□□□ -2.28
SKN1P33336 RPL26BYGR034W 384 nt0.8□□□□□ -2.28
SKN1P33336 YIR030W-AYIR030W-A 384 nt0.8□□□□□ -2.28
SKN1P33336 ABF2YMR072W 552 nt0.8□□□□□ -2.28
SKN1P33336 YMR307C-AYMR307C-A 195 nt0.8□□□□□ -2.28
SKN1P33336 YOR302WYOR302W 78 nt0.8□□□□□ -2.28
SKN1P33336 MYO1YHR023W 5787 nt0.8□□□□□ -2.28
SKN1P33336 snR8snR8 190 nt0.79□□□□□ -2.28
SKN1P33336 YGL188C-AYGL188C-A 141 nt0.79□□□□□ -2.28
SKN1P33336 RKR1YMR247C 4689 nt0.79□□□□□ -2.28
SKN1P33336 YIL134C-AYIL134C-A 204 nt0.78□□□□□ -2.28
SKN1P33336 YAL067W-AYAL067W-A 228 nt0.77□□□□□ -2.29
SKN1P33336 YOL155W-AYOL155W-A 135 nt0.77□□□□□ -2.29
SKN1P33336 snR55snR55 98 nt0.76□□□□□ -2.29
SKN1P33336 QCR9YGR183C 201 nt0.76□□□□□ -2.29
SKN1P33336 DOP1YDR141C 5097 nt0.75□□□□□ -2.29
SKN1P33336 UTP20YBL004W 7482 nt0.75□□□□□ -2.29
SKN1P33336 YNL097C-BYNL097C-B 123 nt0.74□□□□□ -2.29
SKN1P33336 YOR072W-BYOR072W-B 162 nt0.74□□□□□ -2.29
SKN1P33336 YBR182C-AYBR182C-A 195 nt0.74□□□□□ -2.29
SKN1P33336 YOR345CYOR345C 351 nt0.73□□□□□ -2.29
SKN1P33336 YKU70YMR284W 1809 nt0.73□□□□□ -2.29
SKN1P33336 SEC8YPR055W 3198 nt0.72□□□□□ -2.29
SKN1P33336 YMR160WYMR160W 2451 nt0.72□□□□□ -2.29
SKN1P33336 COX12YLR038C 252 nt0.72□□□□□ -2.29
SKN1P33336 YOR161W-AYOR161W-A 81 nt0.72□□□□□ -2.29
SKN1P33336 YBR131C-AYBR131C-A 90 nt0.72□□□□□ -2.29
SKN1P33336 COY1YKL179C 2040 nt0.72□□□□□ -2.29
Retrieved 100 of 7,029 protein–RNA pairs in 36.7 ms