Protein–RNA interactions for Protein: P33202

UFD4, Ubiquitin fusion degradation protein 4, yeastyeast

Predictions only

Length 1,483 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD4P33202 YKL202WYKL202W 582 nt-1.93□□□□□ -2.72
UFD4P33202 YPR092WYPR092W 306 nt-1.93□□□□□ -2.72
UFD4P33202 YIL066W-AYIL066W-A 444 nt-1.94□□□□□ -2.72
UFD4P33202 YML100W-AYML100W-A 174 nt-1.95□□□□□ -2.72
UFD4P33202 YOR366WYOR366W 354 nt-1.95□□□□□ -2.72
UFD4P33202 LOC1YFR001W 615 nt-1.96□□□□□ -2.72
UFD4P33202 SPC24YMR117C 642 nt-1.96□□□□□ -2.72
UFD4P33202 AGA2YGL032C 264 nt-1.97□□□□□ -2.72
UFD4P33202 YHL041WYHL041W 450 nt-1.97□□□□□ -2.72
UFD4P33202 APQ13YJL075C 417 nt-1.97□□□□□ -2.72
UFD4P33202 YMR304C-AYMR304C-A 351 nt-1.97□□□□□ -2.72
UFD4P33202 ACF4YJR083C 930 nt-1.98□□□□□ -2.73
UFD4P33202 YBL107W-AYBL107W-A 105 nt-1.98□□□□□ -2.73
UFD4P33202 YGL123C-AYGL123C-A 231 nt-2□□□□□ -2.73
UFD4P33202 YGL239CYGL239C 315 nt-2□□□□□ -2.73
UFD4P33202 YOR011W-AYOR011W-A 207 nt-2□□□□□ -2.73
UFD4P33202 YBR072C-AYBR072C-A 162 nt-2□□□□□ -2.73
UFD4P33202 YOR161W-AYOR161W-A 81 nt-2.01□□□□□ -2.73
UFD4P33202 RRI2YOL117W 1938 nt-2.02□□□□□ -2.73
UFD4P33202 YGL015CYGL015C 393 nt-2.02□□□□□ -2.73
UFD4P33202 snR57snR57 88 nt-2.04□□□□□ -2.74
UFD4P33202 SGF11YPL047W 300 nt-2.04□□□□□ -2.74
UFD4P33202 YCR100CYCR100C 951 nt-2.05□□□□□ -2.74
UFD4P33202 YHR130CYHR130C 336 nt-2.05□□□□□ -2.74
UFD4P33202 YIL032CYIL032C 357 nt-2.05□□□□□ -2.74
UFD4P33202 snR51snR51 107 nt-2.05□□□□□ -2.74
UFD4P33202 ILM1YJR118C 612 nt-2.06□□□□□ -2.74
UFD4P33202 YIL002W-AYIL002W-A 210 nt-2.07□□□□□ -2.74
UFD4P33202 IRC13YOR235W 315 nt-2.07□□□□□ -2.74
UFD4P33202 tY(GUA)QtY(GUA)Q 84 nt-2.07□□□□□ -2.74
UFD4P33202 YDR220CYDR220C 294 nt-2.08□□□□□ -2.74
UFD4P33202 YGL182CYGL182C 324 nt-2.08□□□□□ -2.74
UFD4P33202 YNL146C-AYNL146C-A 195 nt-2.08□□□□□ -2.74
UFD4P33202 VAM3YOR106W 852 nt-2.1□□□□□ -2.75
UFD4P33202 YER084W-AYER084W-A 513 nt-2.11□□□□□ -2.75
UFD4P33202 YBL062WYBL062W 381 nt-2.12□□□□□ -2.75
UFD4P33202 YPL182CYPL182C 384 nt-2.12□□□□□ -2.75
UFD4P33202 YHR050W-AYHR050W-A 171 nt-2.13□□□□□ -2.75
UFD4P33202 MND1YGL183C 660 nt-2.14□□□□□ -2.75
UFD4P33202 RPS30AYLR287C-A 192 nt-2.14□□□□□ -2.75
UFD4P33202 POP7YBR167C 423 nt-2.14□□□□□ -2.75
UFD4P33202 YNL067W-AYNL067W-A 147 nt-2.14□□□□□ -2.75
UFD4P33202 YOL166W-AYOL166W-A 156 nt-2.14□□□□□ -2.75
UFD4P33202 APQ12YIL040W 417 nt-2.15□□□□□ -2.75
UFD4P33202 YMR013C-AYMR013C-A 150 nt-2.16□□□□□ -2.76
UFD4P33202 snR49snR49 165 nt-2.16□□□□□ -2.76
UFD4P33202 YPT6YLR262C 648 nt-2.17□□□□□ -2.76
UFD4P33202 YLR163W-AYLR163W-A 114 nt-2.18□□□□□ -2.76
UFD4P33202 YNL058CYNL058C 951 nt-2.19□□□□□ -2.76
UFD4P33202 YLR264C-AYLR264C-A 117 nt-2.2□□□□□ -2.76
UFD4P33202 BUD26YDR241W 288 nt-2.2□□□□□ -2.76
UFD4P33202 YDR366CYDR366C 399 nt-2.2□□□□□ -2.76
UFD4P33202 HMLALPHA2YCL067C 633 nt-2.21□□□□□ -2.76
UFD4P33202 MATALPHA2YCR039C 633 nt-2.21□□□□□ -2.76
UFD4P33202 HMRA2YCR096C 360 nt-2.21□□□□□ -2.76
UFD4P33202 YLR154W-FYLR154W-F 141 nt-2.21□□□□□ -2.76
UFD4P33202 ZEO1YOL109W 342 nt-2.21□□□□□ -2.76
UFD4P33202 CUP1-1YHR053C 186 nt-2.23□□□□□ -2.77
UFD4P33202 CUP1-2YHR055C 186 nt-2.23□□□□□ -2.77
UFD4P33202 YJL020W-AYJL020W-A 258 nt-2.24□□□□□ -2.77
UFD4P33202 YJL077W-AYJL077W-A 87 nt-2.24□□□□□ -2.77
UFD4P33202 FYV7YLR068W 456 nt-2.25□□□□□ -2.77
UFD4P33202 YOR192C-CYOR192C-C 237 nt-2.26□□□□□ -2.77
UFD4P33202 YCR001WYCR001W 315 nt-2.27□□□□□ -2.77
UFD4P33202 SCEIQ0160 708 nt-2.28□□□□□ -2.77
UFD4P33202 YPR039WYPR039W 336 nt-2.28□□□□□ -2.77
UFD4P33202 RPL22BYFL034C-A 369 nt-2.31□□□□□ -2.78
UFD4P33202 YGL230CYGL230C 444 nt-2.31□□□□□ -2.78
UFD4P33202 YBR126W-BYBR126W-B 144 nt-2.32□□□□□ -2.78
UFD4P33202 MRPL32YCR003W 552 nt-2.35□□□□□ -2.79
UFD4P33202 YER135CYER135C 393 nt-2.35□□□□□ -2.79
UFD4P33202 SDH6YDR379C-A 240 nt-2.38□□□□□ -2.79
UFD4P33202 YNL303WYNL303W 348 nt-2.39□□□□□ -2.79
UFD4P33202 YKL100W-AYKL100W-A 90 nt-2.4□□□□□ -2.79
UFD4P33202 AIM29YKR074W 468 nt-2.41□□□□□ -2.8
UFD4P33202 YOR170WYOR170W 306 nt-2.41□□□□□ -2.8
UFD4P33202 YPR010C-AYPR010C-A 219 nt-2.41□□□□□ -2.8
UFD4P33202 YBL039C-AYBL039C-A 84 nt-2.42□□□□□ -2.8
UFD4P33202 SRB7YDR308C 423 nt-2.44□□□□□ -2.8
UFD4P33202 PMP2YEL017C-A 132 nt-2.44□□□□□ -2.8
UFD4P33202 YAR029WYAR029W 225 nt-2.45□□□□□ -2.8
UFD4P33202 YPL068CYPL068C 882 nt-2.45□□□□□ -2.8
UFD4P33202 HUR1YGL168W 333 nt-2.45□□□□□ -2.8
UFD4P33202 YLR334CYLR334C 381 nt-2.45□□□□□ -2.8
UFD4P33202 YGL052WYGL052W 306 nt-2.47□□□□□ -2.81
UFD4P33202 snR189snR189 189 nt-2.47□□□□□ -2.81
UFD4P33202 YDR354C-AYDR354C-A 144 nt-2.48□□□□□ -2.81
UFD4P33202 YER053C-AYER053C-A 114 nt-2.49□□□□□ -2.81
UFD4P33202 YPR002C-AYPR002C-A 198 nt-2.5□□□□□ -2.81
UFD4P33202 YHR007C-AYHR007C-A 216 nt-2.51□□□□□ -2.81
UFD4P33202 YFR009W-AYFR009W-A 258 nt-2.52□□□□□ -2.81
UFD4P33202 YDR543CYDR543C 300 nt-2.52□□□□□ -2.81
UFD4P33202 YJR087WYJR087W 351 nt-2.52□□□□□ -2.81
UFD4P33202 YAL068W-AYAL068W-A 255 nt-2.52□□□□□ -2.81
UFD4P33202 ATG16YMR159C 453 nt-2.52□□□□□ -2.81
UFD4P33202 snR74snR74 88 nt-2.53□□□□□ -2.81
UFD4P33202 YGR025WYGR025W 303 nt-2.57□□□□□ -2.82
UFD4P33202 YKL083WYKL083W 615 nt-2.57□□□□□ -2.82
UFD4P33202 YPR016W-AYPR016W-A 261 nt-2.58□□□□□ -2.82
UFD4P33202 YEL020C-BYEL020C-B 198 nt-2.61□□□□□ -2.83
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms