Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.01■□□□□ 0.63
PTPN6P29350 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.01■□□□□ 0.63
PTPN6P29350 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN6P29350 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19■□□□□ 0.63
PTPN6P29350 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 AC007322.4-201ENST00000509611 723 ntBASIC19■□□□□ 0.63
PTPN6P29350 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 AC005181.1-201ENST00000604782 1256 ntBASIC19■□□□□ 0.63
PTPN6P29350 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19■□□□□ 0.63
PTPN6P29350 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTPN6P29350 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19■□□□□ 0.63
PTPN6P29350 AC087633.2-202ENST00000565166 1439 ntBASIC19■□□□□ 0.63
PTPN6P29350 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN6P29350 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN6P29350 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN6P29350 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN6P29350 CDV3P1-201ENST00000471403 739 ntBASIC18.99■□□□□ 0.63
PTPN6P29350 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN6P29350 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN6P29350 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.99■□□□□ 0.63
PTPN6P29350 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.99■□□□□ 0.63
PTPN6P29350 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN6P29350 AL050303.2-201ENST00000619798 666 ntBASIC18.99■□□□□ 0.63
PTPN6P29350 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN6P29350 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN6P29350 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PTPN6P29350 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.99■□□□□ 0.63
PTPN6P29350 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTPN6P29350 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN6P29350 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN6P29350 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
PTPN6P29350 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN6P29350 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PTPN6P29350 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
PTPN6P29350 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN6P29350 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.98■□□□□ 0.63
PTPN6P29350 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.98■□□□□ 0.63
PTPN6P29350 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
PTPN6P29350 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PTPN6P29350 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PTPN6P29350 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN6P29350 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
PTPN6P29350 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPN6P29350 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN6P29350 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PTPN6P29350 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.97■□□□□ 0.63
PTPN6P29350 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN6P29350 TREX1-205ENST00000625293 1783 ntBASIC18.97■□□□□ 0.63
PTPN6P29350 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 ID1-201ENST00000376105 1233 ntBASIC18.97■□□□□ 0.63
PTPN6P29350 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN6P29350 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.97■□□□□ 0.63
PTPN6P29350 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.97■□□□□ 0.63
PTPN6P29350 AL356652.1-201ENST00000615962 565 ntBASIC18.97■□□□□ 0.63
PTPN6P29350 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.97■□□□□ 0.63
PTPN6P29350 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PTPN6P29350 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PTPN6P29350 AC068338.2-201ENST00000563278 1430 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms