Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC100791.3-201ENST00000617619 330 ntBASIC17.38■□□□□ 0.37
ACKR3P25106 AC092437.1-201ENST00000624794 1048 ntBASIC17.38■□□□□ 0.37
ACKR3P25106 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
ACKR3P25106 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.38■□□□□ 0.37
ACKR3P25106 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.38■□□□□ 0.37
ACKR3P25106 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.38■□□□□ 0.37
ACKR3P25106 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ACKR3P25106 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.37■□□□□ 0.37
ACKR3P25106 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.37■□□□□ 0.37
ACKR3P25106 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.37■□□□□ 0.37
ACKR3P25106 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.37■□□□□ 0.37
ACKR3P25106 AC231657.2-201ENST00000624556 255 ntBASIC17.37■□□□□ 0.37
ACKR3P25106 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.37■□□□□ 0.37
ACKR3P25106 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
ACKR3P25106 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.37■□□□□ 0.37
ACKR3P25106 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.37■□□□□ 0.37
ACKR3P25106 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.37■□□□□ 0.37
ACKR3P25106 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ACKR3P25106 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.36■□□□□ 0.37
ACKR3P25106 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
ACKR3P25106 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
ACKR3P25106 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.36■□□□□ 0.37
ACKR3P25106 AC007322.1-201ENST00000426983 750 ntBASIC17.36■□□□□ 0.37
ACKR3P25106 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.36■□□□□ 0.37
ACKR3P25106 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.36■□□□□ 0.37
ACKR3P25106 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.36■□□□□ 0.37
ACKR3P25106 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.36■□□□□ 0.37
ACKR3P25106 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
ACKR3P25106 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
ACKR3P25106 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ACKR3P25106 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.35■□□□□ 0.37
ACKR3P25106 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
ACKR3P25106 AC004911.1-201ENST00000416316 871 ntBASIC17.35■□□□□ 0.37
ACKR3P25106 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.35■□□□□ 0.37
ACKR3P25106 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 IKBKGP1-201ENST00000612193 1073 ntBASIC17.35■□□□□ 0.37
ACKR3P25106 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
ACKR3P25106 BX119927.1-201ENST00000636596 1552 ntBASIC17.35■□□□□ 0.37
ACKR3P25106 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.35■□□□□ 0.37
ACKR3P25106 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ACKR3P25106 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
ACKR3P25106 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ACKR3P25106 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ACKR3P25106 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.34■□□□□ 0.37
ACKR3P25106 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ACKR3P25106 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms