Protein–RNA interactions for Protein: P22147

XRN1, 5'-3' exoribonuclease 1, yeastyeast

Known RBP Predictions only

Length 1,528 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XRN1P22147 BUD26YDR241W 288 nt-1.29□□□□□ -2.62
XRN1P22147 BER1YLR412W 825 nt-1.29□□□□□ -2.62
XRN1P22147 SDH7YDR511W 402 nt-1.3□□□□□ -2.62
XRN1P22147 ILM1YJR118C 612 nt-1.3□□□□□ -2.62
XRN1P22147 snR51snR51 107 nt-1.3□□□□□ -2.62
XRN1P22147 YMR158W-BYMR158W-B 321 nt-1.3□□□□□ -2.62
XRN1P22147 SRB7YDR308C 423 nt-1.31□□□□□ -2.62
XRN1P22147 YMR013C-AYMR013C-A 150 nt-1.31□□□□□ -2.62
XRN1P22147 snR72snR72 98 nt-1.32□□□□□ -2.62
XRN1P22147 LOC1YFR001W 615 nt-1.32□□□□□ -2.62
XRN1P22147 SPC24YMR117C 642 nt-1.32□□□□□ -2.62
XRN1P22147 TAR1YLR154W-C 375 nt-1.35□□□□□ -2.62
XRN1P22147 YFL063WYFL063W 456 nt-1.35□□□□□ -2.63
XRN1P22147 YMR254CYMR254C 309 nt-1.35□□□□□ -2.63
XRN1P22147 YER079WYER079W 633 nt-1.36□□□□□ -2.63
XRN1P22147 YHL041WYHL041W 450 nt-1.36□□□□□ -2.63
XRN1P22147 YPL182CYPL182C 384 nt-1.37□□□□□ -2.63
XRN1P22147 MRPL32YCR003W 552 nt-1.38□□□□□ -2.63
XRN1P22147 YIL066W-AYIL066W-A 444 nt-1.38□□□□□ -2.63
XRN1P22147 AGA2YGL032C 264 nt-1.39□□□□□ -2.63
XRN1P22147 YLR282CYLR282C 342 nt-1.39□□□□□ -2.63
XRN1P22147 POP7YBR167C 423 nt-1.39□□□□□ -2.63
XRN1P22147 YGL015CYGL015C 393 nt-1.4□□□□□ -2.63
XRN1P22147 BLI1YKL061W 342 nt-1.4□□□□□ -2.63
XRN1P22147 YDR220CYDR220C 294 nt-1.4□□□□□ -2.63
XRN1P22147 YCR100CYCR100C 951 nt-1.41□□□□□ -2.64
XRN1P22147 SNU13YEL026W 381 nt-1.41□□□□□ -2.64
XRN1P22147 YML100W-AYML100W-A 174 nt-1.41□□□□□ -2.64
XRN1P22147 YGL230CYGL230C 444 nt-1.42□□□□□ -2.64
XRN1P22147 SGF11YPL047W 300 nt-1.42□□□□□ -2.64
XRN1P22147 YPR092WYPR092W 306 nt-1.42□□□□□ -2.64
XRN1P22147 HMLALPHA2YCL067C 633 nt-1.43□□□□□ -2.64
XRN1P22147 MATALPHA2YCR039C 633 nt-1.43□□□□□ -2.64
XRN1P22147 HMRA2YCR096C 360 nt-1.43□□□□□ -2.64
XRN1P22147 YPR039WYPR039W 336 nt-1.43□□□□□ -2.64
XRN1P22147 APQ13YJL075C 417 nt-1.44□□□□□ -2.64
XRN1P22147 ATG16YMR159C 453 nt-1.45□□□□□ -2.64
XRN1P22147 CMC1YKL137W 336 nt-1.46□□□□□ -2.64
XRN1P22147 YBR072C-AYBR072C-A 162 nt-1.46□□□□□ -2.64
XRN1P22147 YER135CYER135C 393 nt-1.47□□□□□ -2.64
XRN1P22147 ZEO1YOL109W 342 nt-1.48□□□□□ -2.65
XRN1P22147 YDR366CYDR366C 399 nt-1.49□□□□□ -2.65
XRN1P22147 YIL002W-AYIL002W-A 210 nt-1.49□□□□□ -2.65
XRN1P22147 YPT6YLR262C 648 nt-1.49□□□□□ -2.65
XRN1P22147 PAU9YBL108C-A 129 nt-1.49□□□□□ -2.65
XRN1P22147 YCR001WYCR001W 315 nt-1.5□□□□□ -2.65
XRN1P22147 HUR1YGL168W 333 nt-1.5□□□□□ -2.65
XRN1P22147 FYV7YLR068W 456 nt-1.5□□□□□ -2.65
XRN1P22147 YNL058CYNL058C 951 nt-1.5□□□□□ -2.65
XRN1P22147 RPL22BYFL034C-A 369 nt-1.52□□□□□ -2.65
XRN1P22147 YJL182CYJL182C 318 nt-1.53□□□□□ -2.65
XRN1P22147 CUP1-1YHR053C 186 nt-1.55□□□□□ -2.66
XRN1P22147 CUP1-2YHR055C 186 nt-1.55□□□□□ -2.66
XRN1P22147 snR34snR34 203 nt-1.55□□□□□ -2.66
XRN1P22147 YGL182CYGL182C 324 nt-1.56□□□□□ -2.66
XRN1P22147 MND1YGL183C 660 nt-1.56□□□□□ -2.66
XRN1P22147 AIM29YKR074W 468 nt-1.56□□□□□ -2.66
XRN1P22147 YLR334CYLR334C 381 nt-1.56□□□□□ -2.66
XRN1P22147 YGR270C-AYGR270C-A 219 nt-1.56□□□□□ -2.66
XRN1P22147 YER084W-AYER084W-A 513 nt-1.57□□□□□ -2.66
XRN1P22147 YHR130CYHR130C 336 nt-1.57□□□□□ -2.66
XRN1P22147 SKI7YOR076C 2244 nt-1.6□□□□□ -2.67
XRN1P22147 YDL011CYDL011C 324 nt-1.61□□□□□ -2.67
XRN1P22147 YIL032CYIL032C 357 nt-1.61□□□□□ -2.67
XRN1P22147 YBL062WYBL062W 381 nt-1.61□□□□□ -2.67
XRN1P22147 YJL077W-AYJL077W-A 87 nt-1.62□□□□□ -2.67
XRN1P22147 YOL166W-AYOL166W-A 156 nt-1.62□□□□□ -2.67
XRN1P22147 YGL123C-AYGL123C-A 231 nt-1.63□□□□□ -2.67
XRN1P22147 YGR025WYGR025W 303 nt-1.63□□□□□ -2.67
XRN1P22147 YJL020W-AYJL020W-A 258 nt-1.63□□□□□ -2.67
XRN1P22147 YKL100W-AYKL100W-A 90 nt-1.63□□□□□ -2.67
XRN1P22147 YAR029WYAR029W 225 nt-1.63□□□□□ -2.67
XRN1P22147 YPR002C-AYPR002C-A 198 nt-1.63□□□□□ -2.67
XRN1P22147 YNL303WYNL303W 348 nt-1.64□□□□□ -2.67
XRN1P22147 YOR192C-CYOR192C-C 237 nt-1.64□□□□□ -2.67
XRN1P22147 YER175W-AYER175W-A 165 nt-1.65□□□□□ -2.67
XRN1P22147 YLR264C-AYLR264C-A 117 nt-1.65□□□□□ -2.67
XRN1P22147 YHR007C-AYHR007C-A 216 nt-1.66□□□□□ -2.68
XRN1P22147 SDH6YDR379C-A 240 nt-1.67□□□□□ -2.68
XRN1P22147 YLR217WYLR217W 324 nt-1.67□□□□□ -2.68
XRN1P22147 TSC3YBR058C-A 243 nt-1.67□□□□□ -2.68
XRN1P22147 snR49snR49 165 nt-1.68□□□□□ -2.68
XRN1P22147 YDR354C-AYDR354C-A 144 nt-1.69□□□□□ -2.68
XRN1P22147 YOR161W-AYOR161W-A 81 nt-1.69□□□□□ -2.68
XRN1P22147 YLR154W-FYLR154W-F 141 nt-1.7□□□□□ -2.68
XRN1P22147 snR9snR9 187 nt-1.71□□□□□ -2.68
XRN1P22147 SCEIQ0160 708 nt-1.73□□□□□ -2.69
XRN1P22147 YDR426CYDR426C 378 nt-1.74□□□□□ -2.69
XRN1P22147 APQ12YIL040W 417 nt-1.74□□□□□ -2.69
XRN1P22147 tP(UGG)QtP(UGG)Q 72 nt-1.75□□□□□ -2.69
XRN1P22147 YPL068CYPL068C 882 nt-1.75□□□□□ -2.69
XRN1P22147 YPL229WYPL229W 621 nt-1.75□□□□□ -2.69
XRN1P22147 YPR010C-AYPR010C-A 219 nt-1.76□□□□□ -2.69
XRN1P22147 YFR009W-AYFR009W-A 258 nt-1.78□□□□□ -2.69
XRN1P22147 YKL083WYKL083W 615 nt-1.79□□□□□ -2.7
XRN1P22147 snR189snR189 189 nt-1.79□□□□□ -2.7
XRN1P22147 YGL052WYGL052W 306 nt-1.8□□□□□ -2.7
XRN1P22147 YJR087WYJR087W 351 nt-1.81□□□□□ -2.7
XRN1P22147 YEL020C-BYEL020C-B 198 nt-1.81□□□□□ -2.7
XRN1P22147 YBL071CYBL071C 309 nt-1.81□□□□□ -2.7
Retrieved 100 of 7,029 protein–RNA pairs in 6.3 ms