Protein–RNA interactions for Protein: P18898

CDC43, Geranylgeranyl transferase type-1 subunit beta, yeastyeast

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CDC43P18898 IST2YBR086C 2841 nt1.71□□□□□ -2.14
CDC43P18898 BUD2YKL092C 3315 nt1.71□□□□□ -2.14
CDC43P18898 snR70snR70 164 nt1.71□□□□□ -2.14
CDC43P18898 snR39BsnR39B 96 nt1.71□□□□□ -2.14
CDC43P18898 TRM732YMR259C 4263 nt1.7□□□□□ -2.14
CDC43P18898 ALY2YJL084C 3141 nt1.7□□□□□ -2.14
CDC43P18898 DNA2YHR164C 4569 nt1.7□□□□□ -2.14
CDC43P18898 RTT101YJL047C 2529 nt1.7□□□□□ -2.14
CDC43P18898 BFR2YDR299W 1605 nt1.69□□□□□ -2.14
CDC43P18898 ADR1YDR216W 3972 nt1.69□□□□□ -2.14
CDC43P18898 PDR1YGL013C 3207 nt1.69□□□□□ -2.14
CDC43P18898 YER172C-AYER172C-A 381 nt1.69□□□□□ -2.14
CDC43P18898 YBL039C-AYBL039C-A 84 nt1.69□□□□□ -2.14
CDC43P18898 YOR161W-AYOR161W-A 81 nt1.69□□□□□ -2.14
CDC43P18898 KCS1YDR017C 3153 nt1.69□□□□□ -2.14
CDC43P18898 GCN2YDR283C 4980 nt1.68□□□□□ -2.14
CDC43P18898 SFB2YNL049C 2631 nt1.68□□□□□ -2.14
CDC43P18898 SOM1YEL059C-A 225 nt1.68□□□□□ -2.14
CDC43P18898 REV3YPL167C 4515 nt1.68□□□□□ -2.14
CDC43P18898 SCD5YOR329C 2619 nt1.68□□□□□ -2.14
CDC43P18898 SIR4YDR227W 4077 nt1.67□□□□□ -2.14
CDC43P18898 YGL123C-AYGL123C-A 231 nt1.67□□□□□ -2.14
CDC43P18898 YHR131W-AYHR131W-A 246 nt1.67□□□□□ -2.14
CDC43P18898 DGR1YNL130C-A 147 nt1.67□□□□□ -2.14
CDC43P18898 PET309YLR067C 2898 nt1.66□□□□□ -2.14
CDC43P18898 tW(CCA)G1tW(CCA)G1 72 nt1.66□□□□□ -2.14
CDC43P18898 tW(CCA)G2tW(CCA)G2 72 nt1.66□□□□□ -2.14
CDC43P18898 tW(CCA)JtW(CCA)J 72 nt1.66□□□□□ -2.14
CDC43P18898 tW(CCA)KtW(CCA)K 72 nt1.66□□□□□ -2.14
CDC43P18898 tW(CCA)MtW(CCA)M 72 nt1.66□□□□□ -2.14
CDC43P18898 tW(CCA)PtW(CCA)P 72 nt1.66□□□□□ -2.14
CDC43P18898 COA6YMR244C-A 315 nt1.66□□□□□ -2.14
CDC43P18898 YPP1YGR198W 2454 nt1.66□□□□□ -2.14
CDC43P18898 TFC3YAL001C 3483 nt1.65□□□□□ -2.14
CDC43P18898 MON2YNL297C 4911 nt1.65□□□□□ -2.14
CDC43P18898 MYO2YOR326W 4725 nt1.65□□□□□ -2.14
CDC43P18898 NUP170YBL079W 4509 nt1.65□□□□□ -2.14
CDC43P18898 IRE1YHR079C 3348 nt1.65□□□□□ -2.15
CDC43P18898 IRC20YLR247C 4671 nt1.65□□□□□ -2.15
CDC43P18898 FKS1YLR342W 5631 nt1.65□□□□□ -2.15
CDC43P18898 SEY1YOR165W 2331 nt1.65□□□□□ -2.15
CDC43P18898 MSB1YOR188W 3414 nt1.64□□□□□ -2.15
CDC43P18898 YGL041C-BYGL041C-B 183 nt1.64□□□□□ -2.15
CDC43P18898 YLL020CYLL020C 306 nt1.64□□□□□ -2.15
CDC43P18898 snR14snR14 160 nt1.64□□□□□ -2.15
CDC43P18898 YJL052C-AYJL052C-A 120 nt1.63□□□□□ -2.15
CDC43P18898 PAN2YGL094C 3348 nt1.63□□□□□ -2.15
CDC43P18898 MSH6YDR097C 3729 nt1.63□□□□□ -2.15
CDC43P18898 NEO1YIL048W 3456 nt1.63□□□□□ -2.15
CDC43P18898 UTP21YLR409C 2820 nt1.62□□□□□ -2.15
CDC43P18898 QCR9YGR183C 201 nt1.62□□□□□ -2.15
CDC43P18898 EMC5YIL027C 426 nt1.62□□□□□ -2.15
CDC43P18898 YMR247W-AYMR247W-A 144 nt1.62□□□□□ -2.15
CDC43P18898 ASE1YOR058C 2658 nt1.62□□□□□ -2.15
CDC43P18898 SEC63YOR254C 1992 nt1.61□□□□□ -2.15
CDC43P18898 STF2YGR008C 255 nt1.61□□□□□ -2.15
CDC43P18898 COX5BYIL111W 456 nt1.61□□□□□ -2.15
CDC43P18898 ATG9YDL149W 2994 nt1.6□□□□□ -2.15
CDC43P18898 RTP1YMR185W 2946 nt1.6□□□□□ -2.15
CDC43P18898 RAD50YNL250W 3939 nt1.59□□□□□ -2.15
CDC43P18898 YAR009CYAR009C 3591 nt1.59□□□□□ -2.15
CDC43P18898 KAP122YGL016W 3246 nt1.59□□□□□ -2.15
CDC43P18898 YCS4YLR272C 3531 nt1.59□□□□□ -2.15
CDC43P18898 TAH1YCR060W 336 nt1.59□□□□□ -2.15
CDC43P18898 PEP1YBL017C 4740 nt1.59□□□□□ -2.16
CDC43P18898 YLR041WYLR041W 321 nt1.58□□□□□ -2.16
CDC43P18898 PDR8YLR266C 2106 nt1.58□□□□□ -2.16
CDC43P18898 MYO4YAL029C 4416 nt1.57□□□□□ -2.16
CDC43P18898 tS(GCU)Q1tS(GCU)Q1 86 nt1.57□□□□□ -2.16
CDC43P18898 INO80YGL150C 4470 nt1.57□□□□□ -2.16
CDC43P18898 SKI3YPR189W 4299 nt1.56□□□□□ -2.16
CDC43P18898 BRE1YDL074C 2103 nt1.56□□□□□ -2.16
CDC43P18898 SLX4YLR135W 2247 nt1.56□□□□□ -2.16
CDC43P18898 SMC4YLR086W 4257 nt1.55□□□□□ -2.16
CDC43P18898 UTP8YGR128C 2142 nt1.54□□□□□ -2.16
CDC43P18898 YDR210WYDR210W 228 nt1.54□□□□□ -2.16
CDC43P18898 RSM22YKL155C 1887 nt1.54□□□□□ -2.16
CDC43P18898 MMS4YBR098W 2076 nt1.54□□□□□ -2.16
CDC43P18898 PMD1YER132C 5262 nt1.53□□□□□ -2.16
CDC43P18898 YDL073WYDL073W 2955 nt1.53□□□□□ -2.16
CDC43P18898 YIL142C-AYIL142C-A 333 nt1.53□□□□□ -2.16
CDC43P18898 TMA7YLR262C-A 195 nt1.53□□□□□ -2.16
CDC43P18898 UFD4YKL010C 4452 nt1.52□□□□□ -2.17
CDC43P18898 SEC31YDL195W 3822 nt1.52□□□□□ -2.17
CDC43P18898 HER1YOR227W 3741 nt1.52□□□□□ -2.17
CDC43P18898 SET3YKR029C 2256 nt1.52□□□□□ -2.17
CDC43P18898 YKL100W-AYKL100W-A 90 nt1.51□□□□□ -2.17
CDC43P18898 NOP9YJL010C 2001 nt1.5□□□□□ -2.17
CDC43P18898 snR81snR81 201 nt1.5□□□□□ -2.17
CDC43P18898 tT(UGU)HtT(UGU)H 72 nt1.5□□□□□ -2.17
CDC43P18898 KIP1YBL063W 3336 nt1.5□□□□□ -2.17
CDC43P18898 KAP120YPL125W 3099 nt1.5□□□□□ -2.17
CDC43P18898 YML002WYML002W 2214 nt1.5□□□□□ -2.17
CDC43P18898 YOR093CYOR093C 4947 nt1.49□□□□□ -2.17
CDC43P18898 YLR422WYLR422W 5799 nt1.49□□□□□ -2.17
CDC43P18898 CDC39YCR093W 6327 nt1.49□□□□□ -2.17
CDC43P18898 VPS15YBR097W 4365 nt1.48□□□□□ -2.17
CDC43P18898 GYP5YPL249C 2685 nt1.48□□□□□ -2.17
CDC43P18898 FYV10YIL097W 1551 nt1.48□□□□□ -2.17
CDC43P18898 STO1YMR125W 2586 nt1.48□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms